Gene Information

Name : C770_GR4pC0899 (C770_GR4pC0899)
Accession : YP_007193197.1
Strain :
Genome accession: NC_019848
Putative virulence/resistance : Virulence
Product : Retron-type reverse transcriptase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.49
Position : 893092 - 894351 bp
Length : 1260 bp
Strand : -
Note : -

DNA sequence :
ATGACTTCGGAAAGTACGACAGACAAGCCGTTTCGAATTGAGAAACGTCGAGTGTACGAAGCTTACAAAGCGGTCAAAGC
CAACCGTGGCGCGGCCGGGGTGGACGGGCAGACGCTGGAGATATTTGAGAAAGACCTTGCAGCAAACCTCTACAAGATCT
GGAATCGGATGTCCTCGGGAACCTACTTTCCGCCGCCGGTGCGCGCCGTCTCCATTCCGAAGAAGGCTGGAGGCGAAAGG
GTTTTGGGTGTGCCCACGGTCAGCGATCGGATCGCGCAGATGGTGGTCAAGCAGATGATCGAGCCGGATTTGGACTCCCT
CTTTCTTCCGGACTCCTACGGTTACAGGCCGGGAAAATCGGCCCTGGATGCTGTCGGAGTGACGCGTCAGCGGTGCTGGA
AGTATGATTGGGTTTTGGAATTCGACATCAAAGGGCTGTTTGACAATCTTCCGCATGATCTCTTGCTGAAGGCGGTCAGA
AAAGACGTCAAATGCAACTGGGCTCTGCTCTACATCGAAAGATGGCTGACTGCGCCTATGGAAAAGAACGGAGAAGTCAT
CGAGCGGTCACGCGGTACCCCACAGGGAGGCGTGGTTAGCCCGATCTTGGCGAATCTCTTTCTGCACTATGCATTTGATC
TCTGGATGACGCGGACGCATCCCGACCTTCCATGGTGTCGATATGCCGACGATGGTCTTGTTCACTGCCAGAGCGAGCAA
CAAGCCGAAGCCCTCAGGGTGGAGCTGAGTTCTCGGCTGGCAGCGTGCGGACTTCAGATGCATCCGACAAAGACCAAGAT
TGTCTACTGCAAGGATCAACGGCGCAGGGAGGCGTATCCGAATGTCACGTTCGACTTTCTCGGGTATCAGTTCCGGCCGC
GACGGGTGGCGAACACACAGCGGGACGAGTTCTTCTGTGGCTACACGCCTGCGGTCAGTCCGACGGCGCTCAAGTCGATG
CGGGCAACGATCAAAAGTTTGAACATCCCGCGGCAGACGCCGGGGACGCTGGCCGAAATAGCCAAACAGCTCAATCCACT
CCTTCGGGGATGGATTGCCTACTATGGACGGTACAGTCGTTCGGCCCTGTCCACTCTGGCTGATTACGTTAATCAGAAAC
TCAGGGCTTGGATCAGGCGAAAGTTCAAACGCTTTCAGTCCCATAAGACACGCGCCAGCCTCTTCTTGCGAAAGCTGGCG
CGGGAAAATCCGGGGCTGTTCGTGCATTGGAAGGCGTTCGGAACGAACACGTTTACCTGA

Protein sequence :
MTSESTTDKPFRIEKRRVYEAYKAVKANRGAAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKAGGER
VLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWKYDWVLEFDIKGLFDNLPHDLLLKAVR
KDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQGGVVSPILANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQ
QAEALRVELSSRLAACGLQMHPTKTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQRDEFFCGYTPAVSPTALKSM
RATIKSLNIPRQTPGTLAEIAKQLNPLLRGWIAYYGRYSRSALSTLADYVNQKLRAWIRRKFKRFQSHKTRASLFLRKLA
RENPGLFVHWKAFGTNTFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 3e-118 55
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 1e-86 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4pC0899 YP_007193197.1 Retron-type reverse transcriptase VFG1512 Protein 8e-87 47