Gene Information

Name : C770_GR4pC0434 (C770_GR4pC0434)
Accession : YP_007192756.1
Strain :
Genome accession: NC_019848
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 441196 - 442038 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGACCATCTGCTCGTCGCCAGCGGATTGACGGCCGGCTACGACAAAACCGAAATCCTGCATGCGCTCGACCTCAC
CATCCCCCCGCGCAAAATCACGGTGATTGTCGGCGCCAATGCCTGTGGCAAGTCCACGTTTCTCCGCACGCTCTCGCGGT
TAATCGCGCCCAGCAAGGGGCAAGTTCTCCTCGACGGCAAATCCATCCACCGGACACCCTCGCGAGATCTCGCCCGGACG
CTAGGTCTGTTGCCGCAATCGCCGATCGCGCCGGAAGGCATCACAGTGGTCGATCTAGTCAGCAGGGGACGGCATCCGCA
TCAAAGCCTGTTTTCCCGCTGGACGCGACGGGACGACGAGGCGGTCGACAGTGCGCTTAGGGCGACAAAGACATTCGACC
TTGCCGATCGGCCGATCGACGAGCTCTCCGGGGGCCAGCGGCAGCGGGTCTGGATCGCCATGGCACTCGCCCAGCAGACC
AACATCCTGCTGCTCGACGAGCCGACGACCTTTCTCGACATCAACCATCAGATCGAGGTGCTCGATCTCCTGACCGATCT
CAACAGCGCGCGTCGAACTACGGTCGTCATGGTGCTGCACGATCTCAACCTTGCTGCCCGCTACGCCGACCATCTCGTGG
CGATTGCCGGTGGGCGCGTGCACATTTCGGGCACTCCGGAAGAGGTGCTCACCGAAGAGACCGTGCGGCATGTTTTCGGC
CTTGATAGTCGCGTCATCAGCGATCCCACGTCGGGTCGGCCAATCATGCTACCGATCGGGCGACACCGGATGGCCGTCAT
CGACGACATGGGCGATGCACCACAAAAGGAGAGGAGCGCATGA

Protein sequence : 
MTDHLLVASGLTAGYDKTEILHALDLTIPPRKITVIVGANACGKSTFLRTLSRLIAPSKGQVLLDGKSIHRTPSRDLART
LGLLPQSPIAPEGITVVDLVSRGRHPHQSLFSRWTRRDDEAVDSALRATKTFDLADRPIDELSGGQRQRVWIAMALAQQT
NILLLDEPTTFLDINHQIEVLDLLTDLNSARRTTVVMVLHDLNLAARYADHLVAIAGGRVHISGTPEEVLTEETVRHVFG
LDSRVISDPTSGRPIMLPIGRHRMAVIDDMGDAPQKERSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-69 54
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-69 54
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-66 54
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-54 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-52 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4pC0434 YP_007192756.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component BAC0164 Protein 9e-55 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4pC0434 YP_007192756.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component VFG0925 Protein 2e-67 51
C770_GR4pC0434 YP_007192756.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component VFG1042 Protein 8e-55 49