Name : C770_GR4pC1270 (C770_GR4pC1270) Accession : YP_007193553.1 Strain : Genome accession: NC_019848 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein, YscJ/HrcJ family Function : - COG functional category : - COG ID : - EC number : - Position : 1249683 - 1250483 bp Length : 801 bp Strand : - Note : - DNA sequence : ATGAAAATTTTCTGGCGGCCCTCAACGATCACGCGCGCGCTGACTCTCGCGCTCATGGTTCTGACGCTGCAGGCCTGCAG CGTCGATCTTTACACCAATCTGGATGAGCGGGAGGCGAACGAGATGGTCGCCACGCTTCTATCGAAAGGCATAGCCGCCA ACCGCGTCCTCCAGAAGGACGGTAAGCTGACGGTCACTGTAGACGAGGATCAATTCTCTCAGGCTGTCGCCTTGCTCAAT ACGGCAGGCTTGCCGAAGGAGAGATTCGCAACGCTCGGCACCGTCTTCAAGCAGGAGGGGCTTGTAGCCTCGCCCGTGCA GGAGCGGGCGCAGATGATCTATGCGCTGAGCGAGGAGCTCTCCCGGACCGTCTCGGAGATCGATGGCGTGCTAGCGGCGC GCGTTCACGTTGTACTACCGGACAATGATCCATTGCAGCGCAACGCGATTCCCGCCTCAGCCTCTGTTTTCATCCGCCAC GAAGCCGATCTTGACGTGAATCCGCTTATCCCGCGGATCAAGACTCTCGTTGCCAACAGCATATCGGGACTGAGCTACGA GAAGGTCTCGGTAGTGCCGGTAGCGAGCCAGCGGACGAGCGAGCCCGCCATGGGCGCGGAACTCACCTCCTTCCTTGGCA TGTGGATGCTGCCCGCGAGCGTCGCCAAGGCCAAACTCATCTTTGGCTGCCTGGCAGGTGCTCTGCTCGCCGCGATGGTA AGCCTCGGTTATCTGGCGTGGCAAAAGCAAAGCAGGCGGCGGAAAGTCTATCCTCTGCAGCCATATGGTCCGGCAAAGTG A Protein sequence : MKIFWRPSTITRALTLALMVLTLQACSVDLYTNLDEREANEMVATLLSKGIAANRVLQKDGKLTVTVDEDQFSQAVALLN TAGLPKERFATLGTVFKQEGLVASPVQERAQMIYALSEELSRTVSEIDGVLAARVHVVLPDNDPLQRNAIPASASVFIRH EADLDVNPLIPRIKTLVANSISGLSYEKVSVVPVASQRTSEPAMGAELTSFLGMWMLPASVAKAKLIFGCLAGALLAAMV SLGYLAWQKQSRRRKVYPLQPYGPAK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 6e-42 | 44 |
hrpB3 | YP_198727.1 | protein HrpB3 | Virulence | Hrp PAI | Protein | 9e-37 | 44 |
hrcJ | YP_362160.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 5e-37 | 44 |
hrpB3 | BAB07855.1 | HrpB3 | Virulence | Hrp PAI | Protein | 7e-37 | 44 |
hrpB3 | AAF61284.1 | HrpB3 | Virulence | Hrp PAI | Protein | 7e-37 | 44 |
hrpB3 | AAB08458.1 | HrpB3 | Virulence | Hrp PAI | Protein | 4e-37 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
C770_GR4pC1270 | YP_007193553.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0409 | Protein | 5e-41 | 47 |
C770_GR4pC1270 | YP_007193553.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0218 | Protein | 8e-42 | 47 |