|
Name : C770_GR4pC1129 (C770_GR4pC1129) Accession : YP_007193416.1 Strain : Genome accession: NC_019848 Putative virulence/resistance : Virulence Product : Arginine/lysine/ornithine decarboxylase Function : - COG functional category : - COG ID : - EC number : 4.1.1.19 Position : 1097940 - 1100210 bp Length : 2271 bp Strand : + Note : - DNA sequence : ATGGAGTTCTACAAGGCATTCCCCATCGCTGTGATCGATGAAGATTACGAGGGTAAAAGCGCGGCCGGGCGGGGCATGCG CAGCCTCGCAGAGGCGATTGAAAAGGAAGGTTATCGGGTCGTTGCAGGGCTCACCTATGAGGATGCACGCCGCCTCGTGA ACGTCTTCAACACCGAGTCTTGCTGGCTGATTTCAGTCGACGGGACGGAATCAAGTACGACGCGCTGGGAGATTTTAGCC GAGCTGCTCGCCGCGAAACGCTCCCGAAACAACCTGCTGCCAATCTTTCTGTTTGGCGACGATACAACGGCGGAAATGGT GCCGGCGCCCGTGCTGCGCCACGCCAATGCCTTTATGCGTCTTTTCGAGGATTCTCCGGAATTCATGGCGCGCGCGATCG TGCGCGCGGCGCAGAATTATCTTGAGAGGCTTCCGCCTCCAATGTTCAAGGCGTTGATGGAATACACGCTTCACGGCGCC TATTCCTGGCACACGCCAGGGCACGGAGGCGGGGTGGCGTTTCGCAAGAGCCCGGTTGGCCAGCTCTTTTATGCGTTTTT TGGAGAGAACACACTTAGGTCGGACATTTCTGTGTCCGTCGGCAGCGTTGGTTCGCTCCTCGACCATGTTGGGCCGATTG GCGAGGGTGAGCGCAATGCCGCTCGCATATTTGGTGCGGATGAGACGCTATTCGTTGTAGGCGGCACATCGACCGCCAAT AAGATCGTGTGGCACGGAATGGTCACTCGGAACGACCTCGTCCTCTGCGACCGAAACTGCCATAAGTCTATCCTGCACTC GCTGATCATGACGGGTGCAACGCCGATTTACCTGATGCCCTCACGCAACGGCCTCGGCATCATCGGGCCGATTGCGAAGG AGCAGTTTACCCCAGAGGCAATCGCGCACAAGATCGCCGCCAGTCCGTTCGCCAGTGAGACGAACGGTAAAGTGCGCCTG ATGGTAGTGACAAACTCCACCTATGATGGGCTCTGCTACAATGTAGATGGAATCAAATCGGCGCTCGGCGATGCGGTGGA GGTACTGCATTTCGACGAGGCCTGGTTTGCTTACGCCAATTTTCACGAATTCTACGATGGCTATCACGCGATCTCTTCAA CGAAGCCCGCGCGCTCGCAAGAAGCCATCACATTCGCAACCCAGTCGACGCACAAGCTGCTGGCCGCCTTCTCTCAAGCT TCAATGCTTCATGTGCAGCATGCCGTGGCGAAGCAACTCGACATCACACGCTTCAACGAAGCGTTCATGATGCACACATC GACATCGCCGCAATATGGGATCATCGCCTCGTGCGACGTGGCTGCTGCCATGATGGAGCAGCCCGCCGGGCGGGCGCTGG TACAGGAGACCATTGACGAAGCCATGAGTTTCCGCCGAGCCGTCAACGCCGTGCGGACACAGATGCAGGATTCCTGGTGG TTCGAAGTCTGGGAGCCCCCCATCGCGGATCGGGCCCCGAGCGACGCCACGTCGGATTGGCTTCTAAAGCCCGGTGACGC GTGGCATGGTTTCGAAGACTTGGCTGAGAATCACGTGATGGTTGACCCGATCAAGGTCACGATCCTTTCGCCCGGGCTCA ATGCGGGCGGAGCGATGCTCGAGCATGGTATTCCGGCTGCAGTCGTCACGAAGTTCCTTTCTTCTCGCCGGATCGAAATC GAGAAAACCGGCCTCTACTCCTTCCTAGTGCTCTTCTCCATGGGGATCACACGGGGCAAGTGGAGCACCCTGATCACCGA GCTCTTGAACTTCAAAGACCTCTATGATGCCAATGCGCCTCTTTCACGCGCCCTTCCCGCCCTCGCGGCAGCCCATCCGG ACGTCTACCGTGCAATGGGCCTTAGAGAACTTTGCGAGAAAATTCACGATGTGTACCGCAGCGACGACGTGCCGAATGCC CAGCGCGAGATGTACACCGTGCTGCCCGAAATGGCACTGCGCCCGGCAGACGCCTACAACCGCCTGGTCAAGGGGTGCGT TGAAAGCGTCGATATCGACGAATTGATCGGCCGGACACTCGCAGTCATGATTGTACCCTATCCTCCGGGGATCCCGCTCA TCATGCCTGGCGAGCGGATCACCGCAGCCACAAGATCGATCCAGGACTATCTCGTCTACGCCCGGAGTTTCGACAGGAAA TTCCCGGGATTTGAGACGGACATCCACGGACTCCGTTTCGTCGCTAACCCAAGTGGACGGAGATATCTCGTGGATTGCAT CGTCGAGGAGGGACAAGATGATACCGCGTGA Protein sequence : MEFYKAFPIAVIDEDYEGKSAAGRGMRSLAEAIEKEGYRVVAGLTYEDARRLVNVFNTESCWLISVDGTESSTTRWEILA ELLAAKRSRNNLLPIFLFGDDTTAEMVPAPVLRHANAFMRLFEDSPEFMARAIVRAAQNYLERLPPPMFKALMEYTLHGA YSWHTPGHGGGVAFRKSPVGQLFYAFFGENTLRSDISVSVGSVGSLLDHVGPIGEGERNAARIFGADETLFVVGGTSTAN KIVWHGMVTRNDLVLCDRNCHKSILHSLIMTGATPIYLMPSRNGLGIIGPIAKEQFTPEAIAHKIAASPFASETNGKVRL MVVTNSTYDGLCYNVDGIKSALGDAVEVLHFDEAWFAYANFHEFYDGYHAISSTKPARSQEAITFATQSTHKLLAAFSQA SMLHVQHAVAKQLDITRFNEAFMMHTSTSPQYGIIASCDVAAAMMEQPAGRALVQETIDEAMSFRRAVNAVRTQMQDSWW FEVWEPPIADRAPSDATSDWLLKPGDAWHGFEDLAENHVMVDPIKVTILSPGLNAGGAMLEHGIPAAVVTKFLSSRRIEI EKTGLYSFLVLFSMGITRGKWSTLITELLNFKDLYDANAPLSRALPALAAAHPDVYRAMGLRELCEKIHDVYRSDDVPNA QREMYTVLPEMALRPADAYNRLVKGCVESVDIDELIGRTLAVMIVPYPPGIPLIMPGERITAATRSIQDYLVYARSFDRK FPGFETDIHGLRFVANPSGRRYLVDCIVEEGQDDTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 1e-118 | 44 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 4e-121 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| C770_GR4pC1129 | YP_007193416.1 | Arginine/lysine/ornithine decarboxylase | VFG1670 | Protein | 7e-119 | 44 |
