|
Name : C770_GR4Chr0646 (C770_GR4Chr0646) Accession : YP_007189215.1 Strain : Sinorhizobium meliloti GR4 Genome accession: NC_019845 Putative virulence/resistance : Virulence Product : flagellar protein export ATPase FliI Function : - COG functional category : - COG ID : - EC number : 3.6.3.14 Position : 690773 - 692176 bp Length : 1404 bp Strand : + Note : - DNA sequence : ATGGCACGCGAAGCCGCTGAAAAAACTGCAACATCGACGTCGCTCGCGGCGCTCGCCGGGCTGGTCGAGCGTTATGCAAA TCCCGACTTTGCCATCGCACCGGGCGGTCATGTCCAGACGATTTCGCCGGGGCATTACACGGTTAGCGGCCTGTCGCGGC ACGTCCGGCTCGGGGACTTCGTGGCGCACAAGAGCACGACCGGCACCCATCTCGGCGAAGTCGTCCGCGTCGAGCCCGAG CGGGTGGTCGTTTGCCCGATCGAACCGGGGGACCCGATCGGCATCCATGACGTCGTCATCCGCAAGGGCGCCTTCCGCAT AGCGCCGACCGACAACTGGTGCGGCCGCACCATCAATGCGCTGGCCGAGCCGATCGACGGCCTGGGCGCGCTGCTGCAGG GCGACATCCGCCGCTCGATCGCAAACACCGCGCCGCCATCCATGACGCGCAAGCGGGTGGAGCAGGGCTTCAGGACGGGC GTGCGGGCGATAGACATCTTCTCCCCGCTCTGCCTCGGGCAGCGCCTCGGAATCTTCGCGGGCTCCGGCGTCGGCAAATC GACGCTGCTTTCCATGCTGGCCCGCGCCGACGCCTTCGACAAGGTGGTGATCGCCCTGGTCGGCGAGCGCGGCCGCGAAG TGCGCGAATTCATCGAGGACACGCTGGGCGACAATCTTTCGAAATCGGTCGCCGTCGTCGCCACCAGCGACGAGAGCCCG ATGCTGAGAAAAATGGCGCCGCTGACCGCGGTCACGATTGCCGAACATTATCGCGACAAGGGCGACAACGTGCTGCTCAT CGTCGACAGCGTCACGCGTTTCGCCCATGCGATCCGTGAGGTGGCGACGGCAGCGGGGGAGCCGCCGATCGCCCGCGGCT ATCCGGCCTCGGTCTTCACCGAATTGCCGCGGCTGCTCGAGCGCGCCGGGCCCGGCGCCGAGGGAGCCGGCACGATCACG GCGATCATTTCGATCCTGGTCGATGGCGACAATCACAACGACCCGGTCGCCGACTCGGCGCGCGGCATTCTCGACGGGCA CATCGTCCTCGACCGAAGCCTTGCCGAAGAGGGGCGCTACCCGCCGGTAAACCCGCTCGCCTCCATCTCGCGCCTTGCCA GAAAGGCCTGGACGCCGGACCAGGAGAAGCTGGTTGCCCGGCTGAAATCCTTGATCCACCGCTTCGAGGAAACCCGGGAC CTCAGGCTCATCGGCGGCTACCGGCCGGGCGGCGACGCCGATCTCGACATGGCGATAAAGCAAGTGCCGGTCATCTACGA CGTCTTGAAGCAGATGCCCGGCGAACGGCCCGCCTTCGACGCCTTCACGGACCTCGCCAACGCGCTGAAGGCAGCCGCGA TGGGCAATCAGCCGGGCGCCGCCGGCCTGCGCGGAAGGGGATGA Protein sequence : MAREAAEKTATSTSLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGEVVRVEPE RVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQGDIRRSIANTAPPSMTRKRVEQGFRTG VRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFDKVVIALVGERGREVREFIEDTLGDNLSKSVAVVATSDESP MLRKMAPLTAVTIAEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGAEGAGTIT AIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLARKAWTPDQEKLVARLKSLIHRFEETRD LRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMPGERPAFDAFTDLANALKAAAMGNQPGAAGLRGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-64 | 49 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-64 | 48 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-64 | 48 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-64 | 48 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-64 | 48 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-64 | 48 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 9e-65 | 48 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-64 | 47 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-64 | 47 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 5e-51 | 46 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 8e-50 | 45 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 9e-59 | 45 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 2e-49 | 45 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 8e-51 | 45 |
| escN | CAI43874.1 | EscN protein | Virulence | LEE | Protein | 4e-57 | 44 |
| escN | YP_003223475.1 | translocator EscN | Virulence | LEE | Protein | 6e-57 | 44 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 2e-58 | 44 |
| escN | AAL57542.1 | EscN | Virulence | LEE | Protein | 2e-56 | 44 |
| escN | CAC81862.1 | EscN protein | Virulence | LEE II | Protein | 9e-57 | 44 |
| escN | YP_003232153.1 | T3SS structure protein EscN | Virulence | LEE | Protein | 1e-56 | 44 |
| escN | AAK26715.1 | EscN | Virulence | LEE | Protein | 2e-56 | 44 |
| escN | AAC31513.1 | L0034 | Virulence | LEE | Protein | 6e-58 | 44 |
| unnamed | ACU09458.1 | type III secretion apparatus H+-transporting two-sector ATPase | Virulence | LEE | Protein | 6e-58 | 44 |
| escN | YP_003236088.1 | translocator EscN | Virulence | LEE | Protein | 9e-58 | 44 |
| escN | NP_290268.1 | hypothetical protein | Virulence | LEE | Protein | 8e-58 | 44 |
| ECs4568 | NP_312595.1 | EscN | Virulence | LEE | Protein | 8e-58 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| C770_GR4Chr0646 | YP_007189215.1 | flagellar protein export ATPase FliI | VFG0048 | Protein | 1e-64 | 47 |
| C770_GR4Chr0646 | YP_007189215.1 | flagellar protein export ATPase FliI | VFG2144 | Protein | 1e-63 | 46 |
| C770_GR4Chr0646 | YP_007189215.1 | flagellar protein export ATPase FliI | VFG0192 | Protein | 1e-60 | 46 |
| C770_GR4Chr0646 | YP_007189215.1 | flagellar protein export ATPase FliI | VFG0390 | Protein | 2e-61 | 46 |
| C770_GR4Chr0646 | YP_007189215.1 | flagellar protein export ATPase FliI | VFG2331 | Protein | 5e-64 | 46 |
| C770_GR4Chr0646 | YP_007189215.1 | flagellar protein export ATPase FliI | VFG0730 | Protein | 1e-58 | 44 |
| C770_GR4Chr0646 | YP_007189215.1 | flagellar protein export ATPase FliI | VFG0812 | Protein | 4e-58 | 44 |
