Gene Information

Name : C770_GR4Chr3164 (C770_GR4Chr3164)
Accession : YP_007191652.1
Strain : Sinorhizobium meliloti GR4
Genome accession: NC_019845
Putative virulence/resistance : Virulence
Product : ABC-type Mn/Zn transport systems, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3326010 - 3326945 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCTTCAGGAAAAGGCCCGCGCCTATCCGGGAGCAGCTCCGCAAGAGGAGGATGGCGGCATTCGCGTCAGCGGCGC
TACGGTGACCTACCGCAACGGCCACCGGGCGCTGCGCGACGCCTCCTTCGAAATCCCGACGGGCACCATCGCGGCCCTTG
TCGGCGTCAACGGCAGCGGCAAGTCGACGCTGTTCAAAGCTATCATGGGCTTCGTCCGGCTGGCCAAGGGCGACATTTCG
ATCCTGGGCCTCACCGTGCCGCAGGCACTGAGACAGAACCTCGTCGCCTATGTCCCGCAGGCCGAAGAGGTCGACTGGAA
TTTTCCCGTCCTCGTCGAAGACGTGGTGATGATGGGCCGTTACGGCCATATGAACATGCTGCGCATCCCGAAAAAGGCCG
ATCACGAGGCGGTCGAGACGGCGCTGGCGCGGGTCGGCATGAGCGAGTTCCGCAAGCGCCAGATCGGCGAGCTTTCCGGC
GGTCAGAAGAAGCGGGTCTTCCTGGCCCGGGCGCTTGCCCAGAACGGCCGCGTCATCCTGCTCGACGAGCCTTTCACCGG
GGTCGACGTGAAAACGGAGGACGCGATCATCCGCCTGCTCGTCGCGCTTCGCGAAGAAGGCCGTGTGATGCTCGTCTCCA
CCCATAATCTCGGAAGCGTGCCGGAATTCTGCGACCGCACCATCCTTCTGAAAAATACGGTGCTCGCCTACGGTCCCACG
GAAACCACCTTCACCCGCGAAAACCTGGAGCTCGCCTTCGGGGGCGTCCTGCGTCACTTCGTGCTCGGCGGAGAGAACCT
CCATGACGATGCCGATCCACGCCAGCTCTCGGTCATCAGCGACGACGAGCGTCCGCTCGTCATGTATGGCGCCCGCGACC
GCATGGTTGCGCAGCCGGCCAAACCGGAATCGGAATCCGAGGCGGACTCCGAATGA

Protein sequence : 
MNLQEKARAYPGAAPQEEDGGIRVSGATVTYRNGHRALRDASFEIPTGTIAALVGVNGSGKSTLFKAIMGFVRLAKGDIS
ILGLTVPQALRQNLVAYVPQAEEVDWNFPVLVEDVVMMGRYGHMNMLRIPKKADHEAVETALARVGMSEFRKRQIGELSG
GQKKRVFLARALAQNGRVILLDEPFTGVDVKTEDAIIRLLVALREEGRVMLVSTHNLGSVPEFCDRTILLKNTVLAYGPT
ETTFTRENLELAFGGVLRHFVLGGENLHDDADPRQLSVISDDERPLVMYGARDRMVAQPAKPESESEADSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-91 71
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-91 71
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-90 70
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-90 70
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-90 70

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4Chr3164 YP_007191652.1 ABC-type Mn/Zn transport systems, ATPase component BAC0350 Protein 4e-90 70
C770_GR4Chr3164 YP_007191652.1 ABC-type Mn/Zn transport systems, ATPase component BAC0440 Protein 7e-90 64
C770_GR4Chr3164 YP_007191652.1 ABC-type Mn/Zn transport systems, ATPase component BAC0400 Protein 6e-46 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4Chr3164 YP_007191652.1 ABC-type Mn/Zn transport systems, ATPase component VFG0526 Protein 3e-90 70