Gene Information

Name : C770_GR4Chr3032 (C770_GR4Chr3032)
Accession : YP_007191531.1
Strain : Sinorhizobium meliloti GR4
Genome accession: NC_019845
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 3176923 - 3178419 bp
Length : 1497 bp
Strand : +
Note : -

DNA sequence :
ATGACCGACAAGACACAGGCAGCCGGCCTCTCCTCCGACGCGACGGAAGTGCGCTCCCAGAAGCTCGACCTGCTGCGCCA
GCAGATCGGCGACGTCTATCCCGCGCATTTCCACCGTACGCTCACCAATGCGGAACTCGCGGAGAAATATGCCGGGCTGG
AGCCCGATACCGAAAGCGGCGAAACGGTAACCGTTGCCGGCCGCGTTTTCTCCTCGCGCAATTCCGGCATGTTCATGGAT
CTTCATGACGCCTCCGGCAAGATCCAGATCTTTTCGCACAAGGATACGGCACCGGAAGAGGCGCGCGCGCTTCTGCCGAT
GATCGATCTCGGCGACATCATCGGGGTCACCGGAGAGGTGCGCCGCACCAAGCGCGGCGAACTGACCGTCAACGCCAAAG
AGATCACCATGCTCTGCAAGTCGCTCCTGCCGATGCCGGAGAAGTATCACGGGCTTGCCGATATCGAGACGCGCTACCGC
AAGCGCTACCTCGACATCATGGTCAACGAGGAATCGAAGCTGCGCTTCCAGCAGCGAAGCCGCATCGTGTCGAGCCTGCG
CCGATTCCTCGAGGACGAAGGCTTCATGGAAGTGGAGACGCCGATGCTGCAGCCGATCTACGGCGGCGCGACGGCCGAGC
CCTTCAAGACGCATCACAACACGCTGAAGCTCGACATGTATCTGCGCATCGCGCCCGAGCTTTACCTGAAGCGCATTCTC
GTTTCCGGCCTGACGGACAAGGTCTTCGAGATCAACCGCAACTTCCGCAACGAAGGCGTCTCGACCCGGCACAATCCTGA
ATTCACCATGATGGAGTGCTACTGGGCCTATGCTGACTACGAGGACGTGATGGGTCTCGTGGAGCGCATGTTCGAGACCC
TGGCGCTTGCGGTTCACGGCAAGACGGAATTCGAGTTCGGCGACAAGCAGCTCTCCTTCAAGGGGCCGTTCCCGCGCGTC
TCTATGCCGGCGGCCGTCAAGGACGCGACCGGAATCGATTTCCTTGCCCTCAAGAGCGACGAGGAGGCCCGGCAGGCGGC
TCGCGACGCCGGTGTCGAGATCGAGAAGGACGCGACCTGGGGCGAAGTGCTCGCCTTCCTCTTCGAGGAGAAGGTCGAAG
CGACCTTGATCCAGCCTGCTCATGTCATCCACTTCCCGAAGGACATCTCGCCCTTCGCCAAGGAGGTGCCGGGCGAGCCG
CGGCTCGTCGAGCGCTTCGAGACCTATTGCAACGGCTGGGAGATCGGCAACGCCTTTTCCGAGCTCAACGACCCGGTCGA
GCAGCGCGCCCGCATGGTCGAGCAGATGGAACAGGCGCATGCCCGCGGCGAGAAGGAAAAGACGCTGGACGAGGACTTCC
TCGATGCCATGGACCAGGGCATGCCGCCCGCCGGGGGGTTGGGGATCGGTGTCGACCGGCTGATCATGCTGCTCACCAAC
TCGCCGTCGATCCGCGACATCATCCTCTTCCCGGCCCGCCGCCAGAAGGCCGATTGA

Protein sequence :
MTDKTQAAGLSSDATEVRSQKLDLLRQQIGDVYPAHFHRTLTNAELAEKYAGLEPDTESGETVTVAGRVFSSRNSGMFMD
LHDASGKIQIFSHKDTAPEEARALLPMIDLGDIIGVTGEVRRTKRGELTVNAKEITMLCKSLLPMPEKYHGLADIETRYR
KRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRIL
VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDVMGLVERMFETLALAVHGKTEFEFGDKQLSFKGPFPRV
SMPAAVKDATGIDFLALKSDEEARQAARDAGVEIEKDATWGEVLAFLFEEKVEATLIQPAHVIHFPKDISPFAKEVPGEP
RLVERFETYCNGWEIGNAFSELNDPVEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTN
SPSIRDIILFPARRQKAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-103 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4Chr3032 YP_007191531.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 1e-103 47