Gene Information

Name : C770_GR4Chr2739 (C770_GR4Chr2739)
Accession : YP_007191247.1
Strain : Sinorhizobium meliloti GR4
Genome accession: NC_019845
Putative virulence/resistance : Resistance
Product : drug resistance transporter, Bcr/CflA subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2869617 - 2870816 bp
Length : 1200 bp
Strand : +
Note : -

DNA sequence :
ATGCCTACAAAAAACCATGTCTGGCGCTATTCGCTGCCGGCAGCGCTGCTGCTGATGGCGCCCTTCGATATCCTCGCCTC
TCTGGCCATGGATATTTATCTCCCGATCGTTCCTGCGATGCCCGGTATTCTCGGCACCAGCCCCGCCGTGGTTCAGCTCA
CGCTGAGCCTCTATATGGTGATGCTCGGCCTCGGCCAGATCGTCTTCGGGCCCGTCTCCGACCGCATCGGGCGACGGCCA
GTCCTGATCGGCGGAGCGATGCTGTTCGCCGCCGCATCGTTCTGCCTCGCGGCTTCCTCCAGCGCCATCCCTTTCGTCGC
CTTCCGCTTCCTCCAGGCGGTTGGCGCATCTGCGGCTCTGGTGGCCACCTTTGCAACGATCCGGGATGTATATGCCGACC
GCCCGGAAAGCGTGGTCATCTACAGCCTGTTCAGTTCCATTCTGGCATTCGTTCCCGCTCTGGGGCCGATAACCGGTGCC
ATGCTGGCGGAGAGGTTCGGATGGCGCTTGATCTTCGTTACGCTGGGTGCATTAGCCATAATCGCGCTGCTGCAGGCACT
GCCTCGCTGGCATGAATCCCGCCCTTCGGCGGCAGCGCTGTCGCGGCACGCATTCGGCCCCCTTTTCCGCAGCCTCGCCT
TCTGGACCTATACCCTCGGCTTCAGCGCCGCCATGGGCACGTTCTTCGTGTTCTTTTCCACCTCGCCGCGCGTGCTGATC
GACAAGGCAGGATATTCGGAGCTGCAGTTCAGCCTCGCCTTTGCAACTGTAGCAATCGTGATGATCATCACGGCGCGCTT
TGCCGAGCGGTTCGTCTCCCGATGGGGAACTTCGGGCAGCCTCCTGCGGGGCATGTGCATGTTGCTTCTCGGGGCAGCGC
TCCTGATTGCCGGGGAAACGTTCGGCGTCCCTTCGTCCTGGACCTTCGTCATGCCGATGTGGGTGATGGCGGTCGGCATC
GTCTTCACCGTATCGGTGACCGCAAACGGCGCTCTCGAGGATTTTGGAGACATGGCGGGTTCGGCGGTCGCAGTCTATTT
CTGCGTCCAAAGCCTCATCGTCGGGACGGCGGGGACACTGCTCGTGATCGGACTGCCCGGCGACAGCGCGTGGCCGCTTG
TCGTCTATGCCTCGATTATGGCCGGCGTTGTGCTGATCGCGCGCCGGCAGTTGCATTCCAGAAGGCATGTGCAGGCATGA

Protein sequence :
MPTKNHVWRYSLPAALLLMAPFDILASLAMDIYLPIVPAMPGILGTSPAVVQLTLSLYMVMLGLGQIVFGPVSDRIGRRP
VLIGGAMLFAAASFCLAASSSAIPFVAFRFLQAVGASAALVATFATIRDVYADRPESVVIYSLFSSILAFVPALGPITGA
MLAERFGWRLIFVTLGALAIIALLQALPRWHESRPSAAALSRHAFGPLFRSLAFWTYTLGFSAAMGTFFVFFSTSPRVLI
DKAGYSELQFSLAFATVAIVMIITARFAERFVSRWGTSGSLLRGMCMLLLGAALLIAGETFGVPSSWTFVMPMWVMAVGI
VFTVSVTANGALEDFGDMAGSAVAVYFCVQSLIVGTAGTLLVIGLPGDSAWPLVVYASIMAGVVLIARRQLHSRRHVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
floR YP_005176183.1 florfenicol / chloramphenicol efflux protein Not tested ICEPmu1 Protein 2e-105 68
flo AAK02049.1 chloramphenicol and florfenicol resistance protein Not tested SGI1 Protein 7e-107 67
floRc AGK06972.1 chloramphenicol and florfenicol resistance protein Not tested SGI1 Protein 7e-107 67
floRc AGK07102.1 chloramphenicol and florfenicol resistance protein Not tested SGI1 Protein 7e-107 67
cmlA CAJ77032.1 chloramphenicol and florfenicol resistance protein Not tested AbaR1 Protein 2e-106 66
cmlA9 ABZ01840.1 CmlA9 chloramphenicol efflux protein Not tested SGI2 Protein 2e-106 66
cml(A)5 ACY75522.1 CmLA(5) Not tested Tn6060 Protein 1e-79 50
cmlA5 CAJ77046.1 Chloramphenicol resistance protein Not tested AbaR1 Protein 6e-79 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4Chr2739 YP_007191247.1 drug resistance transporter, Bcr/CflA subfamily AF294653.1.gene4.p01 Protein 5e-80 50
C770_GR4Chr2739 YP_007191247.1 drug resistance transporter, Bcr/CflA subfamily DQ522237.1.gene4.p01 Protein 8e-80 50
C770_GR4Chr2739 YP_007191247.1 drug resistance transporter, Bcr/CflA subfamily NC_010410.6003586.p0 Protein 8e-80 50
C770_GR4Chr2739 YP_007191247.1 drug resistance transporter, Bcr/CflA subfamily AF156486.gene.p01 Protein 8e-79 50
C770_GR4Chr2739 YP_007191247.1 drug resistance transporter, Bcr/CflA subfamily DQ984668.gene.p01 Protein 8e-80 50