Gene Information

Name : C770_GR4Chr2718 (C770_GR4Chr2718)
Accession : YP_007191226.1
Strain : Sinorhizobium meliloti GR4
Genome accession: NC_019845
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2846977 - 2849583 bp
Length : 2607 bp
Strand : -
Note : -

DNA sequence :
ATGGATATCGAAAAATATTCGGAACGCGTCCGCGGTTTCCTGCAGTCGGCCCAGACCTATGCGCTGGCCGAAGGGCACCA
GCAATTTACGCCGGAGCACGTTCTCAAGGTATTGCTCGACGACGATCAGGGCATGGCGGCTTCGCTTATCGAGCGCGCCG
GCGGCAATGCGCGGGAAGCCAAGGTCGGTACGGCCGCAGCTTTGGCGAAGCTTCCGAAGGTGACCGGCGGCAACGGCTCG
GTCTATCTGTCGCAGCCGCTCGCCAAGGTTTTCACCGCAGCCGAAGATGCGGCCAAGAAGGCCGGCGACAGCTTCGTAAC
CGTCGAACGCCTGCTCCTGGCGCTGGCGATCGAAAGCTCGGCCGCGACGGCGTCGATCCTCTCCAAGGCCGGCGTCACGC
CGACGAAGCTCAACCAGGTCATCAACGAAATCCGCAAGGGCCGCACCGCCGACAGCGCCAATGCCGAACAAGGCTTCGAT
TCGCTCAAGAAATATGCGCGCGATCTGACCGCCGAGGCGAGGGAAGGCAAGCTCGATCCGGTGATCGGCCGCGACGACGA
GATTCGCCGAACGATCCAGGTGCTCTCGCGCCGGACGAAGAACAATCCCGTGCTGATCGGCGAGCCGGGCGTCGGCAAGA
CCGCCATCGCGGAAGGCCTGGCGCTCAGGATCGTCAACGGCGATGTGCCTGAAAGCCTGAAGGACAAGCGCCTGATGGCG
CTCGACATGGGCGCGCTGATCGCCGGTGCGAAGTTCCGCGGTGAATTCGAAGAGCGGCTCAAGGCCGTGCTGAACGAAGT
GCGCTCGGAAGGTGGCGAGATCATCCTCTTCATCGATGAAATGCACACACTGGTCGGTGCAGGCAAGGCGGACGGGGCTA
TGGATGCCTCGAACCTCCTGAAGCCCGCGCTTGCCCGCGGCGAACTGCACTGCGTCGGCGCGACGACGCTCGACGAATAC
CGCAAGCATGTCGAGAAGGACGCAGCCCTTGCCCGCCGGTTCCAGCCGGTGATGGTCGAGGAACCGACGGTCGAGGATAC
GATCTCGATCCTGCGCGGCCTGAAGGAAAAATACGAGCAGCACCACAAGGTGCGGATCTCCGATTCCGCGCTGGTTGCGG
CTGCGGCACTTTCCAACCGCTACATCACCGATCGTTTCCTTCCGGACAAGGCGATCGACCTCATGGACGAGGCAGCCTCG
CGCCTCAGGATGCAGGTCGATTCGAAGCCGGAAGAACTCGACGAACTCGACAGGCGCGTCATTCAACTGAAGATCGAACG
TGAGGCCTTGAAAAAGGAGACCGACGTTTCCTCCAAGGATCGCCTTGCCAAGCTCGAACTCGATCTGTCTTCGCTCGAAG
AGGAGGCAGCCGCATTGACGGCGCGCTGGCAGGCCGAGAAGCAGAAGCTCGGGCAGGCCGCCGATCTCAAGAAACAGCTC
GACGAAGCGCGCAACGAGCTGCAGATCGCACAGCGCAAGGGCGAATTCCAGCGGGCAGGGGAGCTTGCCTACGGGGTGAT
CCCGAATCTCGAAAAGGAACTGGCCGAAGCGGAAAGCCAGGATGGTGCCAGCGCCAACCCGATGGTGCAGGAGGTCGTGA
CCCCTGACAACATCGCCCATATCGTGTCACGCTGGACCGGCATTCCGGTCGACAAGATGCTGGAAGGCGAGCGCGACAAG
CTGCTCAGGATGGAAGACGAGCTGGCGAAATGGGTCGTCGGTCAGGGTGATGCCGTGCAGGCTGTCTCGCGGGCGGTTCG
CCGTTCGCGCGCAGGGCTTCAGGATCCGAACCGGCCGATCGGCTCCTTCATCTTCCTGGGTCCGACCGGCGTCGGCAAGA
CGGAGCTCACCAAGGCGCTTGCCCGCTTCCTCTTCGACGACGAAACCGCGCTGATGCGGATCGACATGTCCGAGTACATG
GAGAAGCATTCGGTCGCCCGCCTGATCGGCGCGCCTCCCGGCTATGTCGGTTACGAGGAGGGTGGGGCGCTGACGGAATC
GGTCCGCCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGATGTCTTTAACGTGCTTCTGC
AGGTGCTTGACGATGGGCGTCTGACCGATGGTCAGGGGCGCACGGTCGACTTCAAGAACACGATGATCATCATGACCTCC
AACCTCGGTGCGGAATACCTGACCGCACTCGGCGAAAACGAGGACAGCGATGCGGTTCGCGATCAGGTCATGGAAGTGGT
GAGAGCCGCTTTCCGTCCGGAATTTCTGAACCGCGTCGACGAGATCATACTGTTCCACCGGCTGCGCCGCTCGGAAATGG
GCGCGATCGTCGACATTCAGCTCGAAAGGCTGCGCAAGCTCCTCTCGGATCGCAAGATCACGCTCGAGCTCGAGGACGAT
GCCCGCGTTTTCCTGGCGGACAGGGGCTACGATCCGGCCTACGGCGCTCGCCCCCTGAAGCGGGCGATCCAGAAATACGT
TCAGGACCCGCTGGCCGAAAAAGTGCTGCAGGGCGAGTTCCCGGATGGCTCGGTGATCAAGGTCGTTGCCGGTTCCGACC
GTCTGAACTTCAAGCGCGGGGCAGGGGCGAACAAGGAAGCCGCGTAA

Protein sequence :
MDIEKYSERVRGFLQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAKVGTAAALAKLPKVTGGNGS
VYLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATASILSKAGVTPTKLNQVINEIRKGRTADSANAEQGFD
SLKKYARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMA
LDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY
RKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAAS
RLRMQVDSKPEELDELDRRVIQLKIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQL
DEARNELQIAQRKGEFQRAGELAYGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDK
LLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYM
EKHSVARLIGAPPGYVGYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTS
NLGAEYLTALGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELEDD
ARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEFPDGSVIKVVAGSDRLNFKRGAGANKEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-104 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4Chr2718 YP_007191226.1 ATP-dependent chaperone ClpB VFG2076 Protein 4e-117 43
C770_GR4Chr2718 YP_007191226.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-104 42