Gene Information

Name : C770_GR4Chr2324 (C770_GR4Chr2324)
Accession : YP_007190847.1
Strain : Sinorhizobium meliloti GR4
Genome accession: NC_019845
Putative virulence/resistance : Virulence
Product : ABC-type spermidine/putrescine transport systems, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2424081 - 2425079 bp
Length : 999 bp
Strand : +
Note : -

DNA sequence :
ATGAACGCCGCCGTCCTCTTCGACAATGTTTCCCGCTATTTCGGCGCCGTGCGTGCCGTCGATCGCGTGAACCTCGAGAT
CGCCGAGGGCGAGTTCTTCGCGATGCTCGGTCCATCGGGCTCGGGCAAGACCACCTGCCTGAGGCTGATGGCAGGCTTCG
AGCAGCCGACCGGAGGCCACATCGAGATCTTCGGCGAGACCGCCGAAGGCGTGCCGCCCTACCGGCGCAGCGTCAACACC
GTCTTTCAGGACTACGCCCTCTTCCCGCATCTCTCCATTCTCGACAACGTCGCCTATGGCCTGATGGTCAAGGGCGTCGG
ACGCGAGGAGCGCCGCAGGGCGGCCGAGGATGCGCTCGCCATGGTGAAGCTTCCGGGCTACGGCACGCGCCGGCCCGGAC
AGCTTTCCGGCGGCCAGCGCCAGCGCGTGGCGCTCGCCCGCGCGCTCGTCAACAAGCCGAAGGTTCTGCTTCTCGACGAG
CCGTTGGGCGCGCTCGATCTGAAGCTGCGCGAACAGATGCAGGAGGAATTGAAAACGCTGCAGAAGTCGTTGGGCATCAC
CTTCGTCTTCGTCACCCATGATCAGGGCGAAGCGCTCTCGATGGCCGACAGGATCGCCGTTTTCAACGAGGGCCGTATCC
AGCAACTGGGAAGCCCGGAGGAGGTCTACAACCGTCCGCAGACCCGTTTCGTCGCCGATTTCGTCGGCTCCTCCAACGTG
CTTTCCGAGGACCTCTGCCGCCGACTGGGGCTGAAGGCTTCCTTCGCGAGCCTGCGCCCGGAGGCTGTGGCCATTGCGCC
GCCGAGCGACGGAGCGCTGAGCCTTTCCGGCACTGTCGCTTCGCAGAGCTTCCTCGGCGCCACCAACCGAATCCTGATCG
ACGTCGAGGGTGCCCGCATCGCCGTGGCGAGCCCGGCGGCGCGTGGCGTTCCAGCGGTCGGCAGTCCGGTCACGATCAGC
TTCGCCGCGCACGACCTCCACCCGATGGAGGACGCATGA

Protein sequence :
MNAAVLFDNVSRYFGAVRAVDRVNLEIAEGEFFAMLGPSGSGKTTCLRLMAGFEQPTGGHIEIFGETAEGVPPYRRSVNT
VFQDYALFPHLSILDNVAYGLMVKGVGREERRRAAEDALAMVKLPGYGTRRPGQLSGGQRQRVALARALVNKPKVLLLDE
PLGALDLKLREQMQEELKTLQKSLGITFVFVTHDQGEALSMADRIAVFNEGRIQQLGSPEEVYNRPQTRFVADFVGSSNV
LSEDLCRRLGLKASFASLRPEAVAIAPPSDGALSLSGTVASQSFLGATNRILIDVEGARIAVASPAARGVPAVGSPVTIS
FAAHDLHPMEDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-22 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4Chr2324 YP_007190847.1 ABC-type spermidine/putrescine transport systems, ATPase component VFG1206 Protein 2e-26 42