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Name : C770_GR4Chr1604 (C770_GR4Chr1604) Accession : YP_007190150.1 Strain : Sinorhizobium meliloti GR4 Genome accession: NC_019845 Putative virulence/resistance : Resistance Product : Arabinose efflux permease Function : - COG functional category : - COG ID : - EC number : - Position : 1683281 - 1684528 bp Length : 1248 bp Strand : + Note : - DNA sequence : ATGCTCGACAAGAAATTCGTGAGACGCGGTCTGTTCCTCGTCTTCCTCATTCTCTTCCTCGACATCATGGGCATCGCGAT CATCGTGCCGGTGTTGCCGACCTATCTCGAGGAACTGACCGGCGCGGATATCGGCGAGGCCGCGGTCGACGGTGGATGGC TGTTGCTCGTCTACTCGGCGATGCAGTTTCTCTTCGCACCGCTTATCGGGAATCTGAGTGATCGATTCGGGCGTCGGCCG GTCCTGCTTGCGTCCGTGCTGACCTTTGCGCTCGACAACCTGATCTGCGCGCTTGCGACCAGCTATTGGATGCTCTTCAT CGGGCGCAGCCTTGCCGGCATCAGCGGCGCGAGCTTCGGCACGGCATCCGCCTACATTGCCGATGTCAGCGACGATGAGA ATCGCGCCAAGAACTTCGGGCTGATCGGCATTGCCTTCGGCACCGGTTTTGCGCTCGGCCCGGTCATCGGAGGTTTCCTC GGCGAATTGGGCCCGAGAGTGCCCTTTTATGGTGCGGCAGCGCTTTCATTCCTCAATTTCATCATGGGGGTCTTTCTCCT GCCCGAGACGCTCGCCCCGGCCAACCGGCGGCGCTTCGAATGGCACCGGGCAAACCCGCTCGGCGCGCTCAAGCAGATGC GCCATTACCCGGGCATCGGCTGGGTAGGCCTCGTCTTCTTCCTCTACTGGCTGGCTCACGCCGTCTACCCGGCCGTCTGG TCCTTCGTCGGCTCCTATCGCTACGGGTGGAGCGAAGGGCAGATCGGGCTTTCGCTGGGGATCTTCGGCGTCGGCGGCGC AATCGTGATGGCGCTGGTGCTCCCGCGTGTCGTGGCGGCACTGGGAGAAAGGCGAACGGCGGCACTCGGGCTCACCTTCA CGGCCCTCGGGATGGCGGGCTATGCGGCCGCCTGGGAGGGGTGGATGGTCTACGCGGTGATCGTCGCGACCGCGCTCGAA AGCCTAGCCGATCCACCGCTCCGCAGCATAGCCTCCGTCCATGTCCCGCCGTCGGCACAGGGCGAGCTGCAAGGTGCGCT CACCAGCATATCGAGCATTACGACGATCCTCGGACCTCTGATGTTCACGCAGATTTTCGCCTTTTTCACCGACCCTGCAG CCGCCCATAGCTTTGCCGGCGCTCCCTATGCCCTGGCAGGCTGCTTGATCGTCGCCGCGCTGGTGATCTTCCTTGCCAAG GTCGGCGCCGGCCGGGGAGGCGCCGTCCGCGGTGCCGTGCGAGCGTGA Protein sequence : MLDKKFVRRGLFLVFLILFLDIMGIAIIVPVLPTYLEELTGADIGEAAVDGGWLLLVYSAMQFLFAPLIGNLSDRFGRRP VLLASVLTFALDNLICALATSYWMLFIGRSLAGISGASFGTASAYIADVSDDENRAKNFGLIGIAFGTGFALGPVIGGFL GELGPRVPFYGAAALSFLNFIMGVFLLPETLAPANRRRFEWHRANPLGALKQMRHYPGIGWVGLVFFLYWLAHAVYPAVW SFVGSYRYGWSEGQIGLSLGIFGVGGAIVMALVLPRVVAALGERRTAALGLTFTALGMAGYAAAWEGWMVYAVIVATALE SLADPPLRSIASVHVPPSAQGELQGALTSISSITTILGPLMFTQIFAFFTDPAAAHSFAGAPYALAGCLIVAALVIFLAK VGAGRGGAVRGAVRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 3e-49 | 41 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 2e-49 | 41 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 2e-49 | 41 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 2e-49 | 41 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 2e-49 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 2e-49 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| C770_GR4Chr1604 | YP_007190150.1 | Arabinose efflux permease | NC_011586.7045189.p0 | Protein | 2e-47 | 41 |
| C770_GR4Chr1604 | YP_007190150.1 | Arabinose efflux permease | AY264780.2.gene3.p01 | Protein | 5e-48 | 41 |
| C770_GR4Chr1604 | YP_007190150.1 | Arabinose efflux permease | X75761.gene.p01 | Protein | 6e-49 | 41 |
| C770_GR4Chr1604 | YP_007190150.1 | Arabinose efflux permease | NC_010410.6002597.p0 | Protein | 1e-49 | 41 |
| C770_GR4Chr1604 | YP_007190150.1 | Arabinose efflux permease | CP001485.1.gene2821. | Protein | 1e-49 | 41 |
| C770_GR4Chr1604 | YP_007190150.1 | Arabinose efflux permease | AF534183.gene.p01 | Protein | 9e-50 | 41 |
