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Name : lysS (B938_00425) Accession : YP_007184800.1 Strain : Bacillus amyloliquefaciens AS43.3 Genome accession: NC_019842 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 89369 - 90868 bp Length : 1500 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGTCAAGAAGAGCAAAATCATGAGGAATTGAACGACCAGCTGCAAGTCAGACGAGATAAAATGAACCAGCTGAGAGA AAACGGCATTGACCCTTTCGGCGAACGTTTCGAGAGAACGCATCAATCTCAACAGATCATTGACGCCTACCAGGAGCTTT CTAAAGAAGAACTGGAAGAAAAAGCGGTCGAAGTGACCATTGCAGGCCGTATGATGACAAAGCGCGGAAAAGGGAAAGCC GGCTTTGCGCATCTGCAGGACTTAGAAGGTCAAATTCAAATTTACGTAAGAAAAGACAGTGTCGGCGAAGAACAATATGA AATCTTTAAATCTTCAGACCTCGGAGACGTTATCGGCATCACGGGGAAAGTTTTCAAAACAAACGTAGGCGAGCTTTCTG TCAAAGCGACATCTTTCGAACTGCTGACAAAAGCACTGCGTCCTCTTCCTGATAAATATCATGGGTTAAAAGACGTTGAA CAGCGTTACCGCCAGCGCTATCTCGATCTCATCGTAAACCCTGACAGCAAACAAACGTTTATCACACGCAGCAAAATCAT CCAAGCGATGAGAAGATACTTAGATGACCATGGATACTTAGAAGTTGAAACACCTACGATGCACAGCATACCGGGAGGAG CGTCTGCGCGCCCGTTCATCACGCACCATAATGCGCTCGACATGCCTCTTTATATGCGTATTGCGATTGAACTGCACCTG AAACGCCTGATTGTCGGCGGATTGGAAAAAGTCTACGAAATCGGCCGCGTGTTCCGTAACGAAGGTGTTTCTACACGCCA TAACCCTGAATTCACGATGATCGAGCTGTATGAAGCGTACGCCGATTATAAAGATATTATGAGTCTTACGGAAAACCTCG TAGCACATATTGCGCAGGAAGTGCTTGGAAGCACCACAATCCAGTACGGCGAAGAGCAGATTGATCTGAAACCTGAATGG AAACGACTTCACATGGTAGATGCGGTCAAAGAAGCGACAGGTGTAGATTTCTGGAATGAGATGACTGTTGAAGAAGCGCG CGGTCATGCAAAAGAGCATGGTATCGAGATCACAAACTCAATGACGGTGGGTCATATCATCAATGAATTCTTCGAACAAA AAATTGAAGAAACACTCATTCAGCCTACATTTATTTACGGCCACCCTGTAGAGATTTCTCCTCTTGCTAAGAAAAATCCG GAGGACCCTCGCTTTACAGACCGTTTTGAACTGTTTATCGTCGGCCGTGAGCACGCTAATGCGTTTACGGAGCTGAATGA CCCTATTGACCAGAGGGAACGCTTTGAAGCGCAATTAAAAGAAAGAGAAGAAGGAAACGATGAAGCGCATATGATGGATG AAGACTTCGTTGAAGCTCTTGAATACGGCATGCCGCCGACCGGGGGATTGGGTATCGGTATCGACCGCCTTGTCATGCTG TTAACAAATGCTCCGTCTATCAGAGACGTTTTATTATTCCCTCAAATGAGACAACGATAA Protein sequence : MSQEEQNHEELNDQLQVRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAVEVTIAGRMMTKRGKGKA GFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDLGDVIGITGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE QRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHL KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQIDLKPEW KRLHMVDAVKEATGVDFWNEMTVEEARGHAKEHGIEITNSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVML LTNAPSIRDVLLFPQMRQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-127 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007184800.1 | lysyl-tRNA ligase | VFG1668 | Protein | 6e-128 | 53 |
