Gene Information

Name : B938_18370 (B938_18370)
Accession : YP_007188342.1
Strain : Bacillus amyloliquefaciens AS43.3
Genome accession: NC_019842
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3717716 - 3719014 bp
Length : 1299 bp
Strand : +
Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases

DNA sequence :
TTGGGAGTTGCGGTTTTATCAGCGCTGATTTTTGTGCTGACACTTGTGTTTGTCATATGGCAGCCGAAACATGTATCAAT
CGGCTGGTCTGCCTGCGGCGGGGCGGTCCTCGCTTTGATCGCCGGAGCAGTCAGCCTGCACGATATCGCGGAAGTGACGG
GAATCGTCTGGAATGCGACACTTGCCTTTATCGCCATTATTATCATTTCATTGATTCTTGACAGTATCGGTTTTTTTGAG
TGGGCCGCGCTGCATATGGCCATGGCGGCCAAGGGCAGCGGGCTGCGGATGTTTCTCTATGTGTCGGTCTTAGGGGCTGT
TGTCTCCGCCCTGTTTGCCAATGACGGAGCGGCGCTCATTTTGACCCCGATCGTACTGGCGATGGTGCGGGCTTTGAATT
TACCTGAAAAGCTGGTTTTTCCTTTTATTATCGCCGGAGGATTCATCGCCGACACCACCTCGCTTCCGCTCGTTGTAAGC
AATTTGGTCAATATTGTATCCGCCGATTACTTTCATATCGGATACATTGAATATGCATCACGCATGCTGGTGCCCAACCT
TTTTTCTCTGGCGGCAAGCATTTTGGTGCTGTATCTCTATTTCAGAAAAAACATTCCGAAACGGTATGACACCGGTCTTG
TGAAACATCCGGCATCCGCGATTAAGGATGAACGCCTTTTCCGGTTATCGTGGGCTGTGCTGGCCGTTTTATTGATCGGA
TATTTCGTCAGCGAACTGCTGTCGATACCCGTTTCCTTCGTTGCCGGCTCCATCGCGGTCATTTTTCTCATTCTGGCGCA
GCGAAGCCCCGCCGTCCCTGCAAAACAAGTCATCAAGGACGCCCCGTGGGCCATCGTGTTTTTTTCTGTCGGCATGTATG
TTGTCGTGTACGGCTTGCGGAATGCCGGACTGACGGATCTTCTTTCTCAGCTTATACAGAAATCGGCGGATCACGGTTTG
TTTGCGGGCACACTCGGAATGGGGTTTATCGCGGCGATCCTCTCCTCCGTTATGAATAACCTGCCGACGGTGATGATTGA
CGCCATAGCCATCAGCGGAACGGGCACTCACGGGCTGATGAGAGAAGCATTGATTTACGCGAATGTTATCGGTTCGGACC
TCGGGCCGAAAATTACGCCGATCGGGTCGCTGGCGACGTTGTTATGGCTCCACGTGCTGAGCCGGAAAAACGTGAAAATT
TCCTGGGGAATGTATTTCAAGACAGGTCTGATATTAACCATTCCGACGTTATTCATCACCCTGATCGGACTTTATTTATG
GCTGTTATGGCTCGCTTGA

Protein sequence :
MGVAVLSALIFVLTLVFVIWQPKHVSIGWSACGGAVLALIAGAVSLHDIAEVTGIVWNATLAFIAIIIISLILDSIGFFE
WAALHMAMAAKGSGLRMFLYVSVLGAVVSALFANDGAALILTPIVLAMVRALNLPEKLVFPFIIAGGFIADTTSLPLVVS
NLVNIVSADYFHIGYIEYASRMLVPNLFSLAASILVLYLYFRKNIPKRYDTGLVKHPASAIKDERLFRLSWAVLAVLLIG
YFVSELLSIPVSFVAGSIAVIFLILAQRSPAVPAKQVIKDAPWAIVFFSVGMYVVVYGLRNAGLTDLLSQLIQKSADHGL
FAGTLGMGFIAAILSSVMNNLPTVMIDAIAISGTGTHGLMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSRKNVKI
SWGMYFKTGLILTIPTLFITLIGLYLWLLWLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-117 68
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-111 66
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-118 66
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-94 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B938_18370 YP_007188342.1 arsenical pump membrane protein BAC0574 Protein 6e-116 68
B938_18370 YP_007188342.1 arsenical pump membrane protein BAC0575 Protein 6e-119 66
B938_18370 YP_007188342.1 arsenical pump membrane protein BAC0576 Protein 3e-94 60
B938_18370 YP_007188342.1 arsenical pump membrane protein BAC0578 Protein 8e-95 60
B938_18370 YP_007188342.1 arsenical pump membrane protein BAC0577 Protein 4e-95 59
B938_18370 YP_007188342.1 arsenical pump membrane protein BAC0031 Protein 4e-90 58