Gene Information

Name : B938_16225 (B938_16225)
Accession : YP_007187921.1
Strain : Bacillus amyloliquefaciens AS43.3
Genome accession: NC_019842
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3316365 - 3318158 bp
Length : 1794 bp
Strand : -
Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases

DNA sequence :
ATGATTTTTGCATTGGATACGTATCTCGTTTTACTTTCCGTTGTTATAGGATATCAATTTTTTGAGGATTCTTATCACTT
TTATGACTCCGGAGCGTTGCTGCTGACTGCCGTGAGCATGCTGATCAGCCATCATGTATGCGCTTTTATGTTTCACCAGT
ATAAGCAGGTATGGACGTACACGGGAATAGGCGAGCTGCTTGATCTGCTGAAGGGGATCACGCTGTCCGCAGCTGTGACA
GCCGCCGTCCAATACGGGGTGTTCCACACGATTTTGTTCCGGCTGTTGGCCGTCAGCTGGATGGTTCAGCTATTGTTCAT
CGGAGGAAGTCGGATGATTTCACGGGTGCTGAAAGAAACGATCGGCAGGAAGCAAAATGACTCTTCCAGGGCGCTGATCA
TCGGCGCAGGTGCGGGGGGGACGCTGCTCGTCCGTCAGCTTACCCAGAAAAACGATCTCGGAATCATGCCTGTGGCTTTT
ATTGATGATGATCAGACGAAGCATAAGCTCGAAATCATGGGCCTGCCCGTCATCGGCGGAAAAGAAAGCATTATGCCGGC
GGTGCAGAGGCTGAGAATCCACCATATTATCATTGCCATTCCGTCTCTTTGCACCCATGAGCTTCAGACGTTATACAAAG
AATGTGTGCAGACGGGCGCCCATATTAAAATCATGCCGCAATTTGATGAGGTCCTGCTCGGAACGCAGGCTGCCGGACAC
ATCAGAGATGTAAAAGCCGAAGATCTGCTCGGCAGAAAGCCGGTCACCCTTGATACGAGCAAAATTTCTGACAGCATCAA
GGGAAAAACGATTCTGGTCACAGGCGCCGGCGGCTCAATCGGTTCTGAGATCTGCCGCCAGATCAGCGCGTTTCTTCCGC
GGGAAATCGTCCTTCTCGGCCACGGGGAGAACAGCATTCATTCCGTACATACCGAGCTGTCCGCACGCTTCGGCAAAGAG
GTCCTCTTTCACGCGGAGATCGCCGATATTCAGGACAGAGATAAAATCTTTACTTTGATGAAAAAATACGAGCCGCACGT
CGTCTATCATGCGGCTGCCCATAAACATGTGCCGTTAATGGAACATAATCCGGAAGAAGCCGTTAAAAACAACATTATCG
GTACGAAAAATGTCGCCGAAGCCGCCGACATGTGCGGAACGGAAACCTTCGTGCTGATTTCTTCTGACAAAGCGGTCAAT
CCGGCCAATGTCATGGGCGCGACGAAACGGTTTGCGGAAATGGTCATCATGAACCTCGGAAAGGTCAGCAGCACCAAATT
CGCCGCCGTCCGTTTCGGAAATGTGCTCGGAAGCCGCGGCAGCGTCATTCCGATTTTCAAAAAGCAGATTGAAAAAGGCG
GACCCGTCACCGTCACGCATCCGGCGATGACAAGATATTTTATGACGATTCCCGAAGCGTCAAGACTCGTCATTCAGGCC
GGGGCGCTTGCAAAAGGGCGGCAGATTTTCGTTCTGGATATGGGAGAACCCGTCAAAATCGTCGATCTGGCAAAAAACCT
GATTCATTTATCAGGCTATACGACAGAACAGATTCCCATCGAATTCTCCGGCATCCGCCCGGGAGAAAAGATGTATGAAG
AATTGCTGAATCATAATGAAGTACATACGGAGCAGATTTTTCCGAAAATCCATATCGGGAAAGCGGTGGACGGGAATTGG
GCCGTGCTCATCCGTTTTATGGAGGAATTCAGCCGTCTGCCTGAAGAAGAGCTGAGAAAAAGGCTGTTTGAGGCGATCGA
ATCAGTACATGAAGAAGCGGCCGCAGGCGTGTGA

Protein sequence :
MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTYTGIGELLDLLKGITLSAAVT
AAVQYGVFHTILFRLLAVSWMVQLLFIGGSRMISRVLKETIGRKQNDSSRALIIGAGAGGTLLVRQLTQKNDLGIMPVAF
IDDDQTKHKLEIMGLPVIGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEVLLGTQAAGH
IRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISAFLPREIVLLGHGENSIHSVHTELSARFGKE
VLFHAEIADIQDRDKIFTLMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVN
PANVMGATKRFAEMVIMNLGKVSSTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQA
GALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELLNHNEVHTEQIFPKIHIGKAVDGNW
AVLIRFMEEFSRLPEEELRKRLFEAIESVHEEAAAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-117 54
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-114 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B938_16225 YP_007187921.1 hypothetical protein VFG1300 Protein 6e-121 52