Gene Information

Name : B938_13510 (B938_13510)
Accession : YP_007187382.1
Strain : Bacillus amyloliquefaciens AS43.3
Genome accession: NC_019842
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2789585 - 2792224 bp
Length : 2640 bp
Strand : -
Note : COG0258 5'-3' exonuclease (including N-terminal domain of PolI)

DNA sequence :
ATGACGGAACGAAAAAAATTAGTGCTTGTCGACGGAAACAGTCTGGCGTATCGGGCGTTTTTTGCATTGCCGCTTTTAAG
CAATGAAAAAGGCATCCATACAAATGCCGTATACGGGTTTGCGATGATTTTAATGAAAATGCTGGAAGATGAAAAGCCGA
CCCACATGCTGGTGGCTTTTGATGCGGGAAAAACCACTTTCCGCCACAGCACGTTTAAAGAATATAAAGGCGGAAGACAA
AAAACGCCGCCGGAGCTTTCAGAACAGATGCCGTTCATCCGCGAGCTCCTTGATGCCTACAAAATCAGCCGCTACGAGCT
TCCTGAATATGAAGCGGACGATATTATCGGCACCCTTGCCGTATCTGCTGAAAAAGAAGGCTTCGAAGTAAAGGTAGTGT
CGGGGGACAAGGACTTAACCCAGCTTGCAACCGGGAAAACGACCGTTGCCATTACGAGAAAAGGCATTACCGACGTGGAA
GATTACACGCCGGAGCACGTGCAAGAAAAGTACGGTCTGACCCCTTTGCAAATCATTGATATGAAGGGATTAATGGGGGA
TTCATCCGATAACATACCGGGCGTCCCCGGCGTCGGAGAAAAAACCGCGATTAAGCTTTTAAAGCAGTTCCATTCGGTTG
AAAAACTGCTTGATTCCATTGATGAAGTCAGCGGAAAAAAATTAAAAGAAAAGCTTGAAGAATATAAGGAACAAGCCCTG
ATGAGCAAAGAGCTGGCGACGATTATGACAAATGCGCCGATTGAAGTCAAGCCCGAAGATTTAGATTACCAAGGGTTTGA
CCGTGAACAAGTTGTTGCCATTTTTAAAGACCTCGGTTTTAATACGCTTCTTGAGCGGCTCGGTGAAGAAAGCGGCGAAA
CGGCGGAAGAAAATTTTGAAGACATCAATGTTGAAACGGCAGAAGAAATCACTGAAGATATGCTCGTTTCGCCGTCCGCT
TTGGTCGTTGAACAAATCGGTGATAACTATCACGAAGAACCGATCCTCGGCTTTTCCATCGTGAATGAAACAGGTCTTTA
TTATATTCCGAAAGAAATCGCCATTCAGTCTGAAGCTTTTAAATCTTGGGCTGAAGATGAATCGATGAAAAAGTGGGTGT
TCGACAGCAAACGTTCCGTCGTCGCTTTGCGCTGGCAGGGAATTGAGCTGAAGGGAACGGAATTTGACGCGCTTCTTGCT
GCCTACATTATAAACCCGGGCAATTCGTACGACGATGTCGCGAGCGTAGCGAAAGAATACGGGCTGAATATCGTTTCAAA
AGATGAAGCGGTATACGGAAAAGGCGCAAAGCGCGCCGTTCCGGCTGAAAAAGAGCTTGCCGATCATCTCGCGCGGAAAG
CGTCTGCCGTTAACAGCCTCCGTGACAAACTGCTTGACGCTTTGGAAGAAAATAATCAGCTTGAGTTATATGAAGATCTC
GAACTCCCGCTTGCGCTAATTCTCGGAGAAATGGAATCAATGGGCGTCAAAGTGGATGTTGAAAGACTGAAGCGAATGGG
CGAAGAGCTCAAGGCAAAGCTGAAAGAATATGAAGAAAAAATCCATGACATCGCCGGTGAGCCGTTTAACATCAATTCAC
CAAAACAGCTCGGCGTCATTCTGTTTGAAAAGCTCGGCCTGCCGCCAGTAAAGAAAACAAAGACAGGCTATTCCACTTCA
GCCGATGTGCTTGAGAAGCTCGCAGACAAACATGATATCGTCGCGCACATTCTGCAATACAGACAAATCGGCAAACTCCA
ATCGACTTATATTGAAGGGCTGCTGAAGGTCACGCGCGAGGATTCTCATAAGGTGCATACAAGATTCAATCAGGCATTGA
CTCAAACCGGACGCCTCAGCTCAACGGATCCGAACCTGCAAAATATTCCGATCCGGCTGGAGGAAGGGCGGAAAATCCGT
CAGGCTTTCGTACCGTCCGAACCGGACTGGCTTATTTTCGCCGCCGATTATTCACAAATTGAATTAAGGGTGCTTGCGCA
TATTTCAAAAGATGAAAATCTGATCGAAGCGTTTACGAATGACATGGACATTCACACAAAAACCGCCATGGACGTGTTTC
ATGTCAGTGAAGATGAAGTGACACAAGCGATGCGCCGCCAGGCAAAGGCCGTCAATTTCGGCATCGTTTACGGCATCAGT
GATTACGGGCTGTCGCAAAACCTCGGCATCACCCGGAAAGAAGCGGGCGCTTTTATTGACCGCTATTTGGAGAGCTTCCC
GGGCGTTAAGGCGTATATGGAAGAATCGGTGCAGGAAGCGAAGCAAAAAGGATATGTCACGACCCTTATGCAGCGCCGCC
GCTATATTCCTGAGCTGACCAGCCGCAACTTCAACCTGCGGAGCTTTGCGGAACGGACGGCCATGAATACGCCGATTCAG
GGAAGCGCCGCCGATATTATTAAAAAAGCCATGATTGACATGGCAGCTGAGCTGAAAGAAAAAAACCTGAAGGCGCGACT
GCTGCTTCAGGTGCACGATGAATTGATTTTTGAAGCGCCTAAGGAAGAAATTGAAATATTAGAGAAGCTGGTTCCTGAAG
TGATGGAGCATGCTTTGGCATTAGACGTGCCGCTGAAGGCGGATTATGCTTCAGGGCCGTCTTGGTACGATGCAAAATAA

Protein sequence :
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGKTTFRHSTFKEYKGGRQ
KTPPELSEQMPFIRELLDAYKISRYELPEYEADDIIGTLAVSAEKEGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVE
DYTPEHVQEKYGLTPLQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYQGFDREQVVAIFKDLGFNTLLERLGEESGETAEENFEDINVETAEEITEDMLVSPSA
LVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSEAFKSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLA
AYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKASAVNSLRDKLLDALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLPPVKKTKTGYSTS
ADVLEKLADKHDIVAHILQYRQIGKLQSTYIEGLLKVTREDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIR
QAFVPSEPDWLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSFAERTAMNTPIQ
GSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 50