Gene Information

Name : xerD (B938_11175)
Accession : YP_007186919.1
Strain : Bacillus amyloliquefaciens AS43.3
Genome accession: NC_019842
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2308805 - 2309695 bp
Length : 891 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGAAGGATCAAATTAAGGATTTCATCCATTATGTGAGGGTTGAAAGAGGGCTGTCCCAAAATACGATGATGTCTTATGA
GCGTGATCTGAAAAGTTATTCTCTCTTCTTAACTGAAAGCCTTCAGATCACTTCATGGAATGATGTGACCCGTCTTCATA
TTATTCAATATTTAAAGCATATAAAGGACTCCGGGAAATCCGGCAAGACGTCTGCGAGGCATTTGGCGTCAATCCGGTCT
TTTCATCAATTTCTGTTAAGGGAAAAAGCCGCGGATAAAGATCCTTCGGTACATATTGAAACACAAAAAACAGAGCGGAC
GCTTCCAAAAGTATTGGCGCTTCACGAAGTTGAGCGGTTATTGGACACGCCTAAGCTTGACAGCCCGTTCGGTCTCAGGG
ATAAAGCCATGCTTGAACTGCTGTACGCAACCGGCATCAGGGTCAGCGAGATGATCGAGCTGAAATTATCCGACGTCCAT
TTGACGATGGGATTTGTCCGCTGCTTCGGAAAAGGGCGGAAAGAGCGGATTGTGCCGATTGGTGAAGCCGCTTCTCATGC
GATAGAAGCATACATTGAAAAAGCCAGAGGGAAATTATTAAAGAAAAACGTAACCGAAGCGCTTTTTCTGAATCATCACG
GCAGGCAGATCAGCCGTCAAGGTTTTTGGAAAAACCTAAAAAAAATCGCACTTGAAGCGGGGATTAAAAAAGAGCTGACA
CCGCACACGCTCCGGCACTCTTTTGCAACGCACCTGCTCGAAAACGGGGCGGATCTGCGCGCCGTGCAGGAGATGCTCGG
ACATGCCGATATTTCCACCACGCAAATTTATACGCATGTGACGAAAACAAGGCTGAAGGACGTGTACAAACAGTATCATC
CGCGCGCTTAG

Protein sequence :
MKDQIKDFIHYVRVERGLSQNTMMSYERDLKSYSLFLTESLQITSWNDVTRLHIIQYLKHIKDSGKSGKTSARHLASIRS
FHQFLLREKAADKDPSVHIETQKTERTLPKVLALHEVERLLDTPKLDSPFGLRDKAMLELLYATGIRVSEMIELKLSDVH
LTMGFVRCFGKGRKERIVPIGEAASHAIEAYIEKARGKLLKKNVTEALFLNHHGRQISRQGFWKNLKKIALEAGIKKELT
PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYKQYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-55 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-55 43