Gene Information

Name : CKCE_0093 (CKCE_0093)
Accession : YP_007184062.1
Strain : Candidatus Kinetoplastibacterium crithidii
Genome accession: NC_019815
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein, SMR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 112387 - 112671 bp
Length : 285 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :

ATGGCAACAATAGCATTAAAAAATTCTATTGGATTCACCAAACTTTGGCCTTCTTTATTCACATGCACATTCTATTTTAT
ATCAACATACTTTTTATCACTAACTCTTGAAGAAATACCAGTAGGAGTTGCTTATGCCATATGGTGCGGAGTTGGAATAG
TTTTAGTTTCAATAATAGGAGCTTTTTTTTTCAAACAAAAACTCGACACCCCAGCTATCATAGGAATATCTATGATAGTA
CTGGGGGTAGTTATAATGAATTTATTCTCTAAGGTTAGTGTGTAA

Protein sequence :

MATIALKNSIGFTKLWPSLFTCTFYFISTYFLSLTLEEIPVGVAYAIWCGVGIVLVSIIGAFFFKQKLDTPAIIGISMIV
LGVVIMNLFSKVSV

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42067.1	hypothetical protein	Not tested	PAI II 536	Protein	2e-13	46

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0324	Protein	5e-15	56
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0002	Protein	4e-15	54
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	NC_010410.6003348.p0	Protein	4e-15	54
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0322	Protein	1e-14	53
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	CP001138.1.gene1489.	Protein	2e-13	53
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0150	Protein	2e-13	52
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0377	Protein	1e-17	50
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	NC_002695.1.913273.p	Protein	3e-13	50
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	CP004022.1.gene1549.	Protein	3e-13	48
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0325	Protein	5e-10	48
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0329	Protein	2e-11	45
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0139	Protein	8e-12	44
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0192	Protein	5e-13	44
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	BAC0326	Protein	5e-10	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CKCE_0093	YP_007184062.1	small multidrug resistance protein, SMR family	VFG1586	Protein	9e-14	46