Gene Information

Name : xerD (CKCE_0746)
Accession : YP_007184680.1
Strain : Candidatus Kinetoplastibacterium crithidii
Genome accession: NC_019815
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 775648 - 776571 bp
Length : 924 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGAACAATCAAATAAGTGAGATAGATGTTTCTGCTCGTTTTATATCTAAGTTTTTAAATTCAATCTGGTTGGAGGAAGG
TTTATCTGATAATACAATTATCTCATATAGAAATGACTTGAATTCATTTGCTGCATGGATGGGAAAAATTTTTGCTAAGA
ATATTATTGATGATGTCAACGTTGAAAGAATTGAAGAATGGTTTGCTAATAACGATGGTTCAATGATAAAGTCATCTACA
TCTAATAGACGGTTAGCTGCTTTAAAGCGTTTTTATTCATGGGCTATGAGAGAAGGCTTGCTTTTATGCAATCCTTGTCT
AAATATAAAAATGGCTAAATCATATAGGAATATTCCGAGCACTCTATCAGAAGAAGAAGTAGAAAAGTTGATAACATCTC
CTGATGTAAGCAATGCTCGAGGTCTAAGGGATAGAGCTATGTTAGAAATGCTATACTCAACAGGCCTAAGAGTATCAGAG
TTAGTTAGTTTAAAGTTAAGAGATATTAACCTAGATGATGGTGTTGTACATGTGGTTCTTGGTAAAGGCAGTAAAGATAG
ATTGGTCCCTTTAGGAGAAGAGTGTATTTTCTGGATATGTAAATATTTGGAGGATTCACGTAGTCGTATTATAAAGTATA
AAAACAGTGAAGTTTTATTCGTTACAAATCAATTGACATCGATGTCTAGGCAAGCATTTTGGCAATTAGTTAAAAAATAT
GCTTTGTTAGCGCAAATTAATATTCCTATTTCTCCCCATGTTTTACGTCATGCCTTTGCTACTCACCTACTAAATCATGG
GGCTGATCTAAGGGTAGTACAATTGTTATTAGGTCATTCTGATATTTCAAGCACGCAGATTTACACACATGTAGCAAATG
AAAGGCTTAAGACTTTACATTTAAAACACCATCCTCGCGGCTAA

Protein sequence :
MNNQISEIDVSARFISKFLNSIWLEEGLSDNTIISYRNDLNSFAAWMGKIFAKNIIDDVNVERIEEWFANNDGSMIKSST
SNRRLAALKRFYSWAMREGLLLCNPCLNIKMAKSYRNIPSTLSEEEVEKLITSPDVSNARGLRDRAMLEMLYSTGLRVSE
LVSLKLRDINLDDGVVHVVLGKGSKDRLVPLGEECIFWICKYLEDSRSRIIKYKNSEVLFVTNQLTSMSRQAFWQLVKKY
ALLAQINIPISPHVLRHAFATHLLNHGADLRVVQLLLGHSDISSTQIYTHVANERLKTLHLKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-53 50
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-53 50