Gene Information

Name : dnaB (CKCE_0249)
Accession : YP_007184212.1
Strain : Candidatus Kinetoplastibacterium crithidii
Genome accession: NC_019815
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 279182 - 280549 bp
Length : 1368 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGAATAATAAATCAAAAGATTTAGATTATCTACGTACTCCACCTCATTCTATAGAAGCAGAACAGTCTGTATTGGGTGG
ATTATTTATAGATAACAGTACTTGGGATAAAGTATCTGATGTTATAAAAGAAGAAGATTTTTATAAAAATGAGCATAAGA
TTATATGGAAACATATAGAAAAATTAATCAGTGCTGACCGTCCTGTTGATATTATTACAATTAATGATTCATTGTTAAAT
TCTGGAAAATCAGAAGATGTAGGTGGTATAGAATATCTTAATGCATTGGCTCACAATACACCTTCTGCTGCAAATATACG
TAGATATGCAGAAATAGTTCGTGAACGTGCTATTTTAAGAAAATTAATTAGCATATCAGAAGAAATATCAGAGAATGCTT
TAAATACAAAAGGAAAAGATGCCAAACAAATATTAGATGAGGCAGAAGCTAAGGTTTTTAGAATAGCACAAGATCGGATA
TCTAATTTTATTGGTTTTCAAGAAATACAGCCTCTATTATCGCAAGTAGTAGAAAGAATAGATGAATTATATAGTCGTGA
TAGCAATTCTGATATTACTGGAGTTCCTACTGGCTTTATAGATTTAGATAAAATGACATCTGGTTTGCAACCTGGTGATT
TAATTGTTGTGGCTGGTCGCCCATCTATGGGTAAAACTGCTTTCTCTATGAATATAGGAGAATATGTTTCAATAGAGCAT
GGTTTGCCAGTAGCTATTTTTTCCATGGAAATGAGTGCCACTCAATTGGCTATGAGAATGCTTGGTTCTATTGGAGTAAT
AGATCAGCATAAAATTCGTACAGGTAGATTAACAGAAGAAGATTGGCCAAAGATAACTAATGCTATACAAAGTATGCAAG
ATGCCCAACTTTATATAGATGAATCTCCTGCATTGAATGTGATGGAAGTCAGAGCTAAAACTAGAAGACTATCACGCCAA
TGTGGACAGCTAGGATTAATTATAATAGATTATATGCAACTGATGTCTGGCAATGGTGAGGAAAATAGGGCTACAGAAAT
TTCTGAAATTAGCCGTTCATTGAAAGGTCTAGCAAAAGAATTAAATTGCCCATTAATAGCTTTATCACAGTTAAATCGTA
GTTTAGAGCAAAGACAAAACAAAAGACCTGTTATGAGTGATCTAAGAGAATCAGGTGCGATTGAACAGGATGCTGACTTA
ATTTTATTTATATATAGAGATGAAATATATAATCCTGATTCGCAAGAAAAAGGAATAGCAGAAATTATTATAGGAAAACA
AAGGAACGGTCCTATTGGTACTATTAAATTAACATTCCAAGGGCCTACAACAAGATTTTTGAATTTTGCTAATACCTCGT
CTATTTAG

Protein sequence :
MNNKSKDLDYLRTPPHSIEAEQSVLGGLFIDNSTWDKVSDVIKEEDFYKNEHKIIWKHIEKLISADRPVDIITINDSLLN
SGKSEDVGGIEYLNALAHNTPSAANIRRYAEIVRERAILRKLISISEEISENALNTKGKDAKQILDEAEAKVFRIAQDRI
SNFIGFQEIQPLLSQVVERIDELYSRDSNSDITGVPTGFIDLDKMTSGLQPGDLIVVAGRPSMGKTAFSMNIGEYVSIEH
GLPVAIFSMEMSATQLAMRMLGSIGVIDQHKIRTGRLTEEDWPKITNAIQSMQDAQLYIDESPALNVMEVRAKTRRLSRQ
CGQLGLIIIDYMQLMSGNGEENRATEISEISRSLKGLAKELNCPLIALSQLNRSLEQRQNKRPVMSDLRESGAIEQDADL
ILFIYRDEIYNPDSQEKGIAEIIIGKQRNGPIGTIKLTFQGPTTRFLNFANTSSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-102 50
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 7e-91 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-90 46
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-89 45
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-89 45
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-87 44
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-85 44
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-85 44
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-74 43