Gene Information

Name : xerD (CKBE_00296)
Accession : YP_007183562.1
Strain : Kinetoplastibacterium blastocrithidii
Genome accession: NC_019814
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 316571 - 317470 bp
Length : 900 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGTTTCTGATTTCTAAGAAAGTTATAGATTCTTTTATAGATAATATTTGGCTAGAAGAAGGTCTTTCCAATAATACATT
ATCTTCGTATAGAAGTGATATAGAGTGTTTTGCTATTTGGATAGAAGGGTTATATAAAAGAAGTATTTTAGATAATATTT
CTAATGAATATATCGATAGATGGTTTTCAGAAAATTTTTTTGTTATAAAGTCAACTACATCTAATAGACGTTTGGCTTCA
TTAAGAAAATTTTATACATGGGCATTACGTGAAAAATTAATAAAAAATAATCCTTGTTTATTAACTAGAACTTCTAAGCA
AGATAAAAACGTGCCGAAAACTTTATCTGAGAATCAAGTAGAGGAGCTACTAAAAGCTCCAAATATTGAAACGGATCGTG
GTGTACGCGATCGTGCAATGTTAGAAACAATGTATTCTACGGGTTTGCGTGTATCAGAATTAATAAATCTAAAAATTAAT
AATATTAATTTATCTGATGGAATTGTTCATGTTGTAATGGGCAAAGGAGGTAAGGATAGAATTGTTCCGCTTGGAGAAGA
ATCTATGTATTGGATAGAAAGGTATACGTCAAGTACTAGATGCAAGTTTCCAGTCTCTAATAAAAACATTTTATTTATTA
CGAGCAGACTAAAAGCAATGACAAGGCAAGCTTTTTGGCAAATGGTGAAAAAATATTCTGTGTTAGCAAAAATAGATACG
CATTTATCACCACATGTTTTAAGGCATGCCTTTGCAACTCATTTATTAAATCATGGTGCTGACTTAAGAGTGGTTCAAAT
GTTATTAGGTCATTCTAATATCTCTACTACTCAGATTTATACACATATTGCTAACGAAAGACTTAGGCAATTACATTATA
TACATCACCCTAGATATTAA

Protein sequence :
MFLISKKVIDSFIDNIWLEEGLSNNTLSSYRSDIECFAIWIEGLYKRSILDNISNEYIDRWFSENFFVIKSTTSNRRLAS
LRKFYTWALREKLIKNNPCLLTRTSKQDKNVPKTLSENQVEELLKAPNIETDRGVRDRAMLETMYSTGLRVSELINLKIN
NINLSDGIVHVVMGKGGKDRIVPLGEESMYWIERYTSSTRCKFPVSNKNILFITSRLKAMTRQAFWQMVKKYSVLAKIDT
HLSPHVLRHAFATHLLNHGADLRVVQMLLGHSNISTTQIYTHIANERLRQLHYIHHPRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-50 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-50 46