Gene Information

Name : Deipe_0702 (Deipe_0702)
Accession : YP_007180047.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Virulence
Product : CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 711359 - 712117 bp
Length : 759 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGGGCCTGTTGGCCTCCTGAGGCCAAACTGAGTTGGGCCAAGCAGGTTGGCATTTCGGCCTTGGGCGCGTACCTTGA
AGTCATGCAGCGCATTCTGGCCATCGACGACGACCCTGGAATGACCACCATGATCAAGCGTGGCCTGACGTACGAGGGCT
ACGCGGTGGATGTGGCCCCTTCCGGGGAAGCCGGACTCAGAATTGCCCGCGAGCGTCAACCGGACCTGGTGATCCTTGAC
GTGATGATGCCCGGATTGGACGGCCTGGAGGTGCTGCGCCGCCTGCGTGCGGTGGAGGCGGACCTGCCGGTCATTCTGCT
CACCGCCAAGGACGCGCCCAACGATCAGGTGGCCGGTCTGGAGGCCGGTGCGGATGACTACGTCACCAAGCCGTTTCGCT
TCGACGTGCTGCTGGCGCGCGTCCGGGCCCTGCTGCGCCGCCACCAGAACATTCGCCAGGAGGTGCTGCGCTTCGCCGAT
GTCTGTATGGACATCGGCGCACACTCCGTGACGCGCGGGACGCGGGACATCGTACTGACCGCACAGGAATTCCGGCTGTT
TCAGGTGTTTTTGGAGCAGCCTACCCGGGTGCTGTCCAAAGCCGCGCTGCTCGACCGCGCCTGGGGCATCGACTACCTGG
GCGACGCCAACGTGGTGGAAGTGTACGTCAAACAGCTGCGCCAGAAGCTGGAGGCCGAGCGCGAGTCGCGCCTGATCCAT
ACCATCCGCGGTGTCGGGTACGTATTGCGCGAAGGATGA

Protein sequence : 
MRACWPPEAKLSWAKQVGISALGAYLEVMQRILAIDDDPGMTTMIKRGLTYEGYAVDVAPSGEAGLRIARERQPDLVILD
VMMPGLDGLEVLRRLRAVEADLPVILLTAKDAPNDQVAGLEAGADDYVTKPFRFDVLLARVRALLRRHQNIRQEVLRFAD
VCMDIGAHSVTRGTRDIVLTAQEFRLFQVFLEQPTRVLSKAALLDRAWGIDYLGDANVVEVYVKQLRQKLEAERESRLIH
TIRGVGYVLREG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator AE000516.2.gene3505. Protein 4e-36 44
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator BAC0197 Protein 1e-34 44
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator BAC0308 Protein 5e-34 43
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator BAC0125 Protein 3e-36 43
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator BAC0083 Protein 4e-33 43
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator AE015929.1.gene1106. Protein 2e-28 41
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator BAC0638 Protein 3e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator VFG1390 Protein 3e-45 47
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator VFG1389 Protein 9e-35 46
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator VFG1386 Protein 3e-41 45
Deipe_0702 YP_007180047.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator VFG0596 Protein 2e-32 41