Gene Information

Name : Deipe_0372 (Deipe_0372)
Accession : YP_007179738.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 407795 - 408493 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCTCGAACTTCGGCAGGTCACCAAGACGTATCCCAGCGGCGAAACCTCCATTCACGCTCTGCGCGAGGTCAGCCACAC
TTTCGGCCCGGGGCTGACGGCGATCGTCGGGCCTTCCGGCAGCGGCAAGAGCACTTTACTGAACCTGATGGCCGGGTTCG
ACACTCCTTCCCGAGGCGCGGTGCTGGTGAACGGACAGGACCTGGGAGGGCTGAGCGAGGCCGGACGGGCCGCCTTGCGG
CTGCGCCACTTTGGTTTCGTGTTTCAGAGCTACAACCTGGTGGCGATCCTGAACGCCGGTGAGAACGTCGAGTTTCCGCT
GACCCTGCTGGGCCTGGCGCCCGCCGAGCGACGTGAGCGAGCAAAAGCGATGCTGGAACAGGTCGGGCTGGGCCAACGCA
CGCGTCACCTGCCCCCGCAGCTTTCGGGCGGCGAGCAACAACGGGTGGCGATCGCCCGCGCCCTGGTCACCGGGCCCGAT
ATCATCCTGGCCGACGAGCCGACCGGGAACCTCGACTCCAAAACCGGCAGCGCCATTCTGGAACTCCTGGTGCAGCCGGC
CCGCGACGGCAAAACGGTGGTGCTGATCACGCACGATCCGGAGGTGGCCGCCCGCGCGGATCAGGTGCTGCACATCCGCG
ACGGTGTCCTGCAGGAGAACGTGGCCCTGAGCGTCCCGCTTCCGGCGGCAGGCCGCTAG

Protein sequence : 
MLELRQVTKTYPSGETSIHALREVSHTFGPGLTAIVGPSGSGKSTLLNLMAGFDTPSRGAVLVNGQDLGGLSEAGRAALR
LRHFGFVFQSYNLVAILNAGENVEFPLTLLGLAPAERRERAKAMLEQVGLGQRTRHLPPQLSGGEQQRVAIARALVTGPD
IILADEPTGNLDSKTGSAILELLVQPARDGKTVVLITHDPEVAARADQVLHIRDGVLQENVALSVPLPAAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_0372 YP_007179738.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-48 47
Deipe_0372 YP_007179738.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 8e-39 46
Deipe_0372 YP_007179738.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-45 45
Deipe_0372 YP_007179738.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-37 43
Deipe_0372 YP_007179738.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 6e-38 42