Gene Information

Name : Deipe_3683 (Deipe_3683)
Accession : YP_007182875.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Unknown
Product : pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3720892 - 3721773 bp
Length : 882 bp
Strand : +
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGGATACAGGTACTTCTCGTGTAAAGACCGGCTTCGCGGAAATGTTCAAGAACGGCGTGATCATGGACGTGGTCACCCC
TGATCAGGCCCGCATCGCGGAAGCGGCCGGAGCGACTGCCGTGATGGCCCTCGAACGGGTTCCCGCCGATATTCGCGTGC
AGGGTGGTGTGGCGCGCATGAGCGACCCTGAGATGATCAAAGGCATCATCGAGGCCGTGAGCATTCCGGTCATGGCCAAG
GTGCGCATCGGGCACTTCGTGGAAGCGCAGATTCTGCAGGCCATCGGCGTGGACTTTATCGACGAATCCGAAGTGCTCAC
CCCGGCCGACGAGAGTTACCACATCGACAAGGCTCCCTTCAAGGTGCCCTTCGTCTGCGGTGCCAAGAACCTCGGCGAAG
CACTGCGACGTGTAGGCGAGGGGGCCAGCATGATCCGGACCAAAGGAGAGGCCGGCACGGGAAATGTCGTCGAAGCCGTT
CGCCACGCCCGGACCGTGCTGGGTGAGATCCGGGCCATTCAGGCCCGTCCGGTTGAGGAACTCATGACAGTGGCGCGCGA
TTTGCAGGCGCCGTACGACCTGGTGCGTTTCGTGCACGAGCACGGCAAGCTGCCGGTCGTGAATTTCGCCGCCGGCGGTG
TGGCCACGCCTGCCGACGCCGCGCTGATGATGCAGCTCGGCCTCGACGGCGTGTTCGTCGGCAGCGGAATTTTCAAAAGC
GGTGACCCGGAGAAGCGCGCACGCGCGATCGTGAAGGCCGTGACGCACTTCAATAACCCCGACGTGCTGGCCGAGGTGAG
CGAGAACCTCGGCGAACCGATGGTGGGAATCAACCTCGACCATCTGCTGCCCGAGGAGAAGCTCGCGTCACGCGGCTGGT
AA

Protein sequence :
MDTGTSRVKTGFAEMFKNGVIMDVVTPDQARIAEAAGATAVMALERVPADIRVQGGVARMSDPEMIKGIIEAVSIPVMAK
VRIGHFVEAQILQAIGVDFIDESEVLTPADESYHIDKAPFKVPFVCGAKNLGEALRRVGEGASMIRTKGEAGTGNVVEAV
RHARTVLGEIRAIQARPVEELMTVARDLQAPYDLVRFVHEHGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKS
GDPEKRARAIVKAVTHFNNPDVLAEVSENLGEPMVGINLDHLLPEEKLASRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-88 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-88 70
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-88 69