Gene Information

Name : Deipe_2512 (Deipe_2512)
Accession : YP_007181744.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2515731 - 2516519 bp
Length : 789 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGATCCAGGCAGGTCCGGCGAGCATTTTTGCCGTGCCAAACGCGGCCGCGGCGGAAGTGCTGTTCGAAACCGAGAATCT
GAGCGTGCGTTACGGCGCGCAGAACGCCCTGGAGCACGCCAGTGTGAACGTGCGAAGCGGTGAGTTCGTGGCGTTGATCG
GTCCCAACGGGGCCGGCAAGAGCACGCTGCTCAAGGCGTTGCTGGGACTCATACCCACTTCCGGTGGATCGGTGCGGTTC
GCGCCCGCCCTCGCTCCACGCCCGAAGGACGCCATCGCTTACGTGCCACAGCAACAGACCCTCGACTGGTCCTTTCCCGT
CACCGTATGGGAAGTCGCCATGATGGGCCGCACCGGACGGCTGGGCTGGCTGCGCTGGCCGGGAAGAACGGACCGTGAAA
TCGTGCGTCGCGCCCTGGAGCAGACCGGGGTGCTCGATCTGCGTCAGCGACCCATCGCGGATTTATCAGGTGGGCAAAAA
CAACGGGTGCTGCTCGCGCGCATGTTGGTCCGTCAGGCGTTGCTGCTGCTGCTGGACGAACCACTCACCGGCGTAGACGC
AGCCACGCAGGAGCGGGTGATGGCGCTCCTGCAAGCTCAGGCGCGGGCAGGCAAGGGTGTGCTGATGGTCACCCACGACC
TGGAAAGCGCGGCACGCTGGTGCGACCGGCTGATTCTGGTCAACCGCTCGGTGATCGCCCAGGGTACTCCGGCAGAGGTC
TACACCCCGCACAACGTCGAAGCCACCTTTTCGAGCTCGCACCTTGGACCTGGACACGAGGGCGCATGA

Protein sequence : 
MIQAGPASIFAVPNAAAAEVLFETENLSVRYGAQNALEHASVNVRSGEFVALIGPNGAGKSTLLKALLGLIPTSGGSVRF
APALAPRPKDAIAYVPQQQTLDWSFPVTVWEVAMMGRTGRLGWLRWPGRTDREIVRRALEQTGVLDLRQRPIADLSGGQK
QRVLLARMLVRQALLLLLDEPLTGVDAATQERVMALLQAQARAGKGVLMVTHDLESAARWCDRLILVNRSVIAQGTPAEV
YTPHNVEATFSSSHLGPGHEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
adcC YP_006309084.1 ABC transporter, Zn porter Not tested FWisland_5 Protein 7e-25 42
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-38 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-37 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-37 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-38 41
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_2512 YP_007181744.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 6e-40 44
Deipe_2512 YP_007181744.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 6e-37 42
Deipe_2512 YP_007181744.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 2e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_2512 YP_007181744.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 2e-38 41