Gene Information

Name : Deipe_2511 (Deipe_2511)
Accession : YP_007181743.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2514922 - 2515734 bp
Length : 813 bp
Strand : -
Note : PFAM: ABC 3 transport family

DNA sequence : 
ATGAACTGGCTACTTGAGCCTCTGCAATACGAGTTCTTTGTACGCGCGCTCCTGAGCGTCACGGTGGTGTCGGTGCTGTG
CGCGGTGATCGGCGTGTACGTGGTGCTGCGTGGCCTCAGCTACATCGGGGACGCGATGAGTCACGCGGTGTTTCCAGGTA
TCGTGGCGGCTTTTCTGCTGAAACTGAATTTGCTGGGAGGTGCAGTGCTGGCGGCACTCGTAACCTCGCTGGGCATCGGG
TTCGTGACGCAGCGCAGCGGCCTCAAGCAGGACAGCGCCATCGGCATCGTCTTTGTGGGCATGTTCGCGCTGGGCGTGGT
GCTGCTGTCCAGTGCCCGCAGTTACGCCGTCGACCTGGCCAATTTTCTGGTCGGCAATCCGCTGGGAGTTTCAGCGCAGG
ACCTGTGGGCGTCCCTGATCGTCACGGGCCTGATCGGCCTGACGCTGACGGTCTTTCAAAAAGAGCTGCTGCTGATCTCC
TTCGACCCGACGGAAGCGCGCGCCATCGGCCTGCCGGTCGGGCGCCTCAACAACCTGCTCTTGATGCTGATCGCGCTGGT
GGTGGTGCTGACCATTCAGCTGGTCGGTACCACCCTGTCGGTGAGTTTGCTGATCACGTCAAGCGCCACCGCCCGCCTGC
TGACCCGCAATCTGCGCGCCATGATGCTGGTCGCAGCCTTGATCGGCAGCCTGAGCGGCGTGATCGGTCTGTATGCTTCG
TACTACCTGAACGTCGCTCCTGGAGCGACCGTAGTGTTGACCAATACCCTGACCTTTCTGCTGGTGCTGATGACCCGTCC
ACGCCTGACCTGA

Protein sequence : 
MNWLLEPLQYEFFVRALLSVTVVSVLCAVIGVYVVLRGLSYIGDAMSHAVFPGIVAAFLLKLNLLGGAVLAALVTSLGIG
FVTQRSGLKQDSAIGIVFVGMFALGVVLLSSARSYAVDLANFLVGNPLGVSAQDLWASLIVTGLIGLTLTVFQKELLLIS
FDPTEARAIGLPVGRLNNLLLMLIALVVVLTIQLVGTTLSVSLLITSSATARLLTRNLRAMMLVAALIGSLSGVIGLYAS
YYLNVAPGATVVLTNTLTFLLVLMTRPRLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-19 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-19 43
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-19 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-19 43
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-20 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_2511 YP_007181743.1 Mn2+/Zn2+ ABC transporter permease BAC0352 Protein 5e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_2511 YP_007181743.1 Mn2+/Zn2+ ABC transporter permease VFG0528 Protein 5e-20 43