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Name : Deipe_2217 (Deipe_2217) Accession : YP_007181468.1 Strain : Deinococcus peraridilitoris DSM 19664 Genome accession: NC_019793 Putative virulence/resistance : Resistance Product : arabinose efflux permease family protein Function : - COG functional category : - COG ID : - EC number : - Position : 2200956 - 2202212 bp Length : 1257 bp Strand : + Note : PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein DNA sequence : ATGAATTTGCGCAAGCCTGCCGCCCTGGTGTTCGTGCTCGCCACCCTGCTGATCGACGTGATGGGCATCGGGCTCATCAT TCCGGTGCTGCCCTCGCTCGTGAAGCAGCTGGCGGGCGGCGAAGCGGCGGGCGCGCAGATGCTGGGAATTCTCACGGCGG TGTACGCCGCGATGCAGTTTTTGTTTGCGCCGCTGCTGGGAGCGCTCAGTGACCGCTTCGGGCGCCGTCCCGTGCTGCTG CTTTCTATTTTCGGGCTGGGCCTCGACTACCTGCTGCTGTACTTTGCCCCGACGCTCGCCTGGCTCTTTGTGGGGCGCGT GCTCGCCGGGATCACGGGTGCCAGCATGGCCGTCGTCAACGCGTACGTCGCCGACGTGACGCCGCCCGAGCAGCGCGCCA AAAGTTACGGCCTGCTGGGCGCGATGTTTGGTCTGGGTTTCATCATCGGGCCCGTGGTCGGTGGCTTTCTCGGGAACATC GATCTGCGCCTGCCGTTCGCGGCGGCCGCCGGCCTGGCACTGGTCAACGCGCTTTACGGCCTGTTCGTGCTGCCCGAGTC GCTCCGGCCCGAACACCGCAACGCCCGGATCGGGGTCCGCAACCTGAGCCCGCTGGTGAGCCTCGCGGCCCTCACGCGCT ACCCGCTCGTGCGCAACCTCGGCGGGAGCTTTATCCTGTTCGGTCTGGCCAATCAGGTCATCTTCAATACCTGGGTGCTC TTTACCGAGGGTGTGCTGAAGTGGAGCCCCGCCCAGAATGGTGCTGCGCTCGCCCTGGTGGGAGTGCTGGCCATCGTCGT GCAGGCGGGACTCGTCGGTTTCGCCATCAAGACCTTCGGCGAGCGCAGCACCATTCTGGGCGGGTTGATGGTCGGCGTGG TGCAGTTCGGTCTGCTGGGCCTGGCCCGCACCGACCTGATGTTCTACATCGCCATCATCATCGGCAGCCTGAGCGGCGTG GCAGGCCCAGCGATGCAGGCCCTCATCAGCCGCAACGTCACCGAGCGCGAGCAGGGCACGGTGCAGGGCGCCATCACCAG CCTGAACAGCGTGGTCGGCATTGTCGGGCCGCTGCTGGCCACCTGGGTGTTCGCTTACTACAACGGGGGAGGAGCGGGCG TGCGCGTGCCCGGCGCGGCGTTCTATCTGGGTGGCGTGTGCTTTCTGTTGGGCACCCTGCTGACGGCGATCGTCCTGCCA CGCGAACCAAGGAAGACCGCAACTCTGCCCGGCGAACCCCTGCCCGGTGAACCCTGA Protein sequence : MNLRKPAALVFVLATLLIDVMGIGLIIPVLPSLVKQLAGGEAAGAQMLGILTAVYAAMQFLFAPLLGALSDRFGRRPVLL LSIFGLGLDYLLLYFAPTLAWLFVGRVLAGITGASMAVVNAYVADVTPPEQRAKSYGLLGAMFGLGFIIGPVVGGFLGNI DLRLPFAAAAGLALVNALYGLFVLPESLRPEHRNARIGVRNLSPLVSLAALTRYPLVRNLGGSFILFGLANQVIFNTWVL FTEGVLKWSPAQNGAALALVGVLAIVVQAGLVGFAIKTFGERSTILGGLMVGVVQFGLLGLARTDLMFYIAIIIGSLSGV AGPAMQALISRNVTEREQGTVQGAITSLNSVVGIVGPLLATWVFAYYNGGGAGVRVPGAAFYLGGVCFLLGTLLTAIVLP REPRKTATLPGEPLPGEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 1e-41 | 42 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-41 | 42 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-41 | 42 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-41 | 42 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 1e-41 | 42 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 1e-41 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | AY264780.2.gene3.p01 | Protein | 1e-47 | 45 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | AY743590.gene.p01 | Protein | 2e-49 | 45 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | Y19114.gene.p01 | Protein | 6e-45 | 42 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | AF090987.gene.p01 | Protein | 1e-41 | 42 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | NC_011586.7045189.p0 | Protein | 4e-37 | 42 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | CP001485.1.gene2821. | Protein | 6e-42 | 42 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | AF534183.gene.p01 | Protein | 5e-42 | 42 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | NC_010410.6002597.p0 | Protein | 6e-42 | 42 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | X75761.gene.p01 | Protein | 2e-41 | 41 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | NC_011595.7059241.p0 | Protein | 2e-35 | 41 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | NC_011586.7043399.p0 | Protein | 2e-35 | 41 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | NC_010410.6003291.p0 | Protein | 2e-35 | 41 |
| Deipe_2217 | YP_007181468.1 | arabinose efflux permease family protein | NC_009085.4918440.p0 | Protein | 7e-34 | 41 |
