Gene Information

Name : Deipe_0209 (Deipe_0209)
Accession : YP_007179578.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 244110 - 245945 bp
Length : 1836 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGACCGATTTTCGTGTGACGACGGGCGCCCTGCCCGGCAGCCGCAAGCTCTACCTCACCCATCCAGACTATGGCGAGCT
TCGCGTGCCAGTTCGCGCGATCTCGCAAAGCCCGACGATTCTGCACGCCGGCGGCCTCGCGCGCTCGGTGCCCAATCCCG
ACGTGCTGGTCTACGACTCCAGCGGCCCCTACACCGACGAACACGCCGACGTCGAGGTGAATGTGTCCGCCGGTCTGCCC
GCCTGCCGCACGTGGCTCGCGAGCCAGCCCGACCTGGAGGAGCTGCCCCGCCCGACCTCAACTTTCAGCCGGGCTCAGCT
GGATGACCCAGCGCAGGCCAAGCTGCAGTTTCCTGTGACTACCCTGCCGCGCCGCGCCCGCTCGGGGCATAAGGTCACAC
AGCTGCACTACGCCCGCCGGGGAATCATCACGCCCGAGATGGAGTTCGTGGCACTGCGCGAGAACCTGCGCCAGGAAGCG
GCCTTCGACTTATCCCACCAGCACTTCGGCGACAGTCGGGGCGCGAGCATTCCGCGTGAAATTACGCCGGAGTTCGTGCG
CTCCGAAATTGCCCGGGGGCGTGCCATCATTCCGGCCAACGTCAATCACCCGGAACTCGAGCCGATGATCATCGGGCGCA
ACTTCCTGGTCAAGATCAACGCCAACATCGGCAACAGCGCCGTGACCTCCTCGATCCTGCAAGAGGTCGAGAAGATGGTC
TGGGCCATCCGCTGGGGCGCGGACACCGTGATGGACCTCTCGACGGGCCGGCACATCCACCAGACCCGCGAGTGGATCGT
GCGGGGCAGCCCGGTCCCCATCGGCACGGTGCCGATCTATCAGGCGCTCGAGAAGGTCGGCGGCAAGGCCGAGGAGCTGA
GCTGGGACATTTACCGTGACACCCTGATCGAACAGGCCGAGCAGGGCGTGGACTACTTCACCATTCATGCGGGCGTGCGG
CTGGCACACATTCCGCTCACGGCGAGGCGCCGGACCGGCATCGTGTCGCGCGGCGGCTCGATTCTGGCCAAGTGGTGCCT
GGCGCATCACCGGGAGAACTTCCTCTACACGCACTTCGAGGAGATCTGCGAGATCATGGCGGCCTACGACGTCAGCTTCA
GCCTGGGAGACGGCCTGCGCCCTGGCAGCATCGAGGACGCCAACGACGCCGCGCAGTTCGCCGAACTGGACACCCTGGGC
GAGCTCACCAGGGTTGCCTGGCAGCACGACGTGCAGACCATGATCGAAGGGCCCGGCCACGTGCCGATGCACCTGATCCA
GGAAAACATGACCCGGCAACTGGCGGTGTGCGAGGAGGCACCCTTTTACACCCTGGGGCCGCTCACGACCGACATCGCGC
CAGGCTACGACCACATCACCAGTGCCATCGGCGCGGCATTGATCGGCTGGTACGGCACGGCCATGCTGTGCTACGTCACC
CCAAAGGAGCATCTGGGGTTGCCGAACCGCGACGATGTGCGCGAGGGCGTCATCACCTACAAGATCGCCGCGCACGCCGC
CGACCTCGCCAAGGGCCACCCGGGGGCGCAGGCGCGCGACAACGCACTCAGCAAGGCCCGCTTCGAGTTTCGCTGGCAGG
ACCAGTTCAATCTGGCCCTCGATCCCGAGCGGGCGCGGGCCTTTCACGATGAAACGCTTCCCGCCGACGCGGCCAAGACC
GCGCACTTCTGCTCGATGTGCGGTCCGCATTTTTGCAGCATGAAGCTCACGCAGGATCTGCAAAAGGACATCCTGCAGGG
CATGCAGGACAAGGCCGCCGAGTTTCGCGCGCAGGGCGGCGAGCTGTACCGTGCGCCGGGCGAGGTCCTGGCGTGA

Protein sequence :
MTDFRVTTGALPGSRKLYLTHPDYGELRVPVRAISQSPTILHAGGLARSVPNPDVLVYDSSGPYTDEHADVEVNVSAGLP
ACRTWLASQPDLEELPRPTSTFSRAQLDDPAQAKLQFPVTTLPRRARSGHKVTQLHYARRGIITPEMEFVALRENLRQEA
AFDLSHQHFGDSRGASIPREITPEFVRSEIARGRAIIPANVNHPELEPMIIGRNFLVKINANIGNSAVTSSILQEVEKMV
WAIRWGADTVMDLSTGRHIHQTREWIVRGSPVPIGTVPIYQALEKVGGKAEELSWDIYRDTLIEQAEQGVDYFTIHAGVR
LAHIPLTARRRTGIVSRGGSILAKWCLAHHRENFLYTHFEEICEIMAAYDVSFSLGDGLRPGSIEDANDAAQFAELDTLG
ELTRVAWQHDVQTMIEGPGHVPMHLIQENMTRQLAVCEEAPFYTLGPLTTDIAPGYDHITSAIGAALIGWYGTAMLCYVT
PKEHLGLPNRDDVREGVITYKIAAHAADLAKGHPGAQARDNALSKARFEFRWQDQFNLALDPERARAFHDETLPADAAKT
AHFCSMCGPHFCSMKLTQDLQKDILQGMQDKAAEFRAQGGELYRAPGEVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 67
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 67