Gene Information

Name : Deipe_1943 (Deipe_1943)
Accession : YP_007181212.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1943278 - 1944705 bp
Length : 1428 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGAAACACTTTGATCGAGCCACCAAAATCGTCGCGACGGTGGGACCCGCCAGCCGTGACGCCCAGACGCTGGAGCGCAT
GATCGACGCGGGAATGAACGTCGTGCGCATGAACTTCTCGCACGGCGAGCGCGAAGATCACCGTGAAACCTACGAACTCG
TCCGTTCGATTGCCCGGAAAAAAGGCGTGACGATTGGAATCCTGCAAGACCTCCAGGGCCCCAAGATTCGGGTGGGACGC
TTCAAGGAAGGTCGGGTGACGCTGGAAGCCGGTCAGAAGTTCATCATCACGATGGACGACATCGAAGGCGACCAGCAGCG
CGTGGGCAGTACCTACAAGGGTCTGGCCGAGGACGTACGGCCCGGCATGACCTTGCTGCTCGACGACGGCAACATGGCGT
TGCGCGTCGAGGGTGTGCGTGGTTCGGACGTCGAGACGAGCGTCGCCATCGGCGGCGTCCTCAAGAACAACAAGGGCATC
AACGTGCCCGAGGCCGACCTCAGCGTGCCCGCCATGAGCGACAAGGACGTCGAGGACATGGAGTTTGGCGCGCAGCTGGG
CGTCGATTGGGTGGCGCTGTCGTTCGTCCGCTCGCGCGACGACATGCTGCTCGCCAGGCACTACCTGGCGCGTTTTGGCT
CACGCGCCAAGCTGATGGCCAAAATCGAGAAGCCCCAGGCCGTAGAGCGCTTCGAGGACATTTTGCGCGAAGCCGACGGC
ATCATGGTGGCGCGCGGTGACCTGGGCGTCGAGATGCGTCCCGAGCAGGTGCCGGTCATTCAGAAAAAGCTGATCCGTGC
CTGCCGTGAAGCGGCCAAGCCGGTCATCACCGCGACCCAGATGCTTGAAAGCATGATCAACCTGCCGCGCCCGACCCGCG
CCGAGGCGAGTGACGTGGCCAACGCGATTTTCGACGGCACCGACGCGGTAATGCTCTCGGCCGAGAGCGCTGCGGGCCTC
TACCCGGTCGAGAGCGTGGCCATGATGGACCACATTGCGCGCGAAGCCGAGGCCTCGGACCTTTACCGCCTGTCGCAGGC
GCGCTCCATCGATACCGAACTCGCCACCGACTCGATCGCGGACGCGGCCTGCGACATCGCCGAGACGCTGAACGCCAGCG
CGATCACCACTTTCACGCTCACCGGCGGCTCGGCGATGCGGGTGGCACGCAACCGCCCGCGGGTGGCGATTCTGGCCCTC
ACGCCCAACGAGCGCACCCGCAACCAGCTGGCGCTGACCTGGGGCATCGTACCCGTACAGGCCGAGGATCCCGGCAACAC
CGACGACATGGTGCGCATCGCCACCGACGAGCTGCGCCGTTCGCGCGTGGCCGACGCAGGCGACCGTTTCGTGATCACGG
CGGGTGTGCCGTTCGGGGTGCGCGGTACCACCAACATGATCCGGGTGGAGCGACTGCAGAAAGCCTGA

Protein sequence :
MKHFDRATKIVATVGPASRDAQTLERMIDAGMNVVRMNFSHGEREDHRETYELVRSIARKKGVTIGILQDLQGPKIRVGR
FKEGRVTLEAGQKFIITMDDIEGDQQRVGSTYKGLAEDVRPGMTLLLDDGNMALRVEGVRGSDVETSVAIGGVLKNNKGI
NVPEADLSVPAMSDKDVEDMEFGAQLGVDWVALSFVRSRDDMLLARHYLARFGSRAKLMAKIEKPQAVERFEDILREADG
IMVARGDLGVEMRPEQVPVIQKKLIRACREAAKPVITATQMLESMINLPRPTRAEASDVANAIFDGTDAVMLSAESAAGL
YPVESVAMMDHIAREAEASDLYRLSQARSIDTELATDSIADAACDIAETLNASAITTFTLTGGSAMRVARNRPRVAILAL
TPNERTRNQLALTWGIVPVQAEDPGNTDDMVRIATDELRRSRVADAGDRFVITAGVPFGVRGTTNMIRVERLQKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-75 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-75 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-75 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 8e-75 43
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 1e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_1943 YP_007181212.1 pyruvate kinase VFG0479 Protein 2e-75 43