Gene Information

Name : Deipe_1710 (Deipe_1710)
Accession : YP_007180998.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1706587 - 1707513 bp
Length : 927 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
TTGGGCAGAACGGACGCCCATGAGGACGCCTGCCCGCTTCTTTGCCAAAGAAAGTCGCTGATCTTCGCGTTCATCCACGA
CAACCGACACGAGTTCCGCCTGGACATCTTGTGCCGAATGCTCGGGGTGGCGATCAGCGGATACTACACCTGGCGAGGAA
GGCCAATCTCGCAACACCAGTTCCACGACGCAGCTCTCTCTTTGCGGATCAAAGCACTGCACGAGCAGTACAAGGGCCGC
TACGGTGCTCCCCGCCTGCACATCGAACTCGCACAGGAGGGCCTGAAGTGCAGCAAGAAGCGCGTAGCTCGTCTGATGCG
GACGGCTGGTCTGAGGGCCAAAGGCAAGCGCAAGCATGTCGTCACCACCGACAGCAATCACGAACTGGCTGTGGCAGAGA
ATCTACTGCAACGCGACTTCCAACCTCAGCAGCCTAACCAGGTCTGGGCTGGAGACATCACCTACATTCCCACCAAGGAA
GGCTGGTTGTACCTGGCAGTCGTGCTGGACTTGTACTCCAGGTTGATCGTGGGGTGGTCGATGAGCGACCGTATGCCTGC
CGAGCTACCGGTGGCGGCCTTGCAGATGGCTGTCCAGCGCCGGTCACCGCCTCCAGGGCTGATTCATCACAGCGACAGGG
GAAGTCAGTACGCCAGTGGGCTCTTCCAGGCTGAACTCCAGCAGATCGGAGCGCAAGCCAGCATGAGTCGGCAGGGAAAT
TGCTGGGACAATGCCTGCGTAGAGAGTTTTTTCGCCACCCTCAAGCGAGAGCTGCTAGATAGTGAGCCGTTTGAGTCACG
AGAAGCAGCCAGGGCCGCCATCTTCTCGTACCTGGAAGTCTTCTACAACCGCCAGCGCCGTCATTCGACCCTTGGCCTTG
GCTACTTGACACCACACCAGGCTGACTGCCATGCTCAAGCCGCTTAA

Protein sequence :
MGRTDAHEDACPLLCQRKSLIFAFIHDNRHEFRLDILCRMLGVAISGYYTWRGRPISQHQFHDAALSLRIKALHEQYKGR
YGAPRLHIELAQEGLKCSKKRVARLMRTAGLRAKGKRKHVVTTDSNHELAVAENLLQRDFQPQQPNQVWAGDITYIPTKE
GWLYLAVVLDLYSRLIVGWSMSDRMPAELPVAALQMAVQRRSPPPGLIHHSDRGSQYASGLFQAELQQIGAQASMSRQGN
CWDNACVESFFATLKRELLDSEPFESREAARAAIFSYLEVFYNRQRRHSTLGLGYLTPHQADCHAQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-56 51
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 9e-57 51
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 3e-54 50
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-56 50
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-56 50
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-56 50
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-56 50
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-56 50
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-56 50
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-56 50
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-56 50
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 4e-55 49
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-55 49
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-53 47
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-53 47
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-53 47
tnpB CAB61574.1 transposase B Not tested HPI Protein 5e-41 43
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 4e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_1710 YP_007180998.1 transposase VFG1631 Protein 2e-54 50
Deipe_1710 YP_007180998.1 transposase VFG1706 Protein 7e-57 50