Gene Information

Name : Deipe_1143 (Deipe_1143)
Accession : YP_007180468.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Virulence
Product : CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1162233 - 1162898 bp
Length : 666 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAGCAAACGCAAAGTACTTATTGTCGAAGACGATCCGGATATCGCCCGTTTTGTGCGTTCCGATCTGGAGGATGCCGG
TTACGAAGTAATGCACGCCGCCGACGCCATGACGGGCCTGGTGACCGTGCGTGAGCAGGCACCCGACCTGATCCTGCTCG
ATCTGGGTCTGCCTGACTTCGATGGCACCGAAGTGCTCGCACGCGTCCGGCGCACCTCGACCCTGCCGATCATCGTGATG
ACCGCCCGCGACACGGCCGATGAGAAAGTCAGCCTGCTCGAAGACGGCGCCGACGACTATGTGGTCAAGCCCTTCGATTC
GCGCGAGCTGATCGCCCGCATCGGGGTTCAGCTGCGTCAGCACGGCGGGGCTCCGATCGAGGTCAACGGCATGGAGCTGA
ACTTGCAGCAACGCCTGGTCAAGTACAACGGCCAGGAAGTGCGCCTGTCTCCCACCGAATTCAATCTGCTGGCGCTGCTC
GCCCGTCAACCGGGCCGCGTGTACTCGCGCGAAGAAATCGAGCGCGAGGTATGGGAAGGCCGCCTGCCCGCCAACAGCAA
CGTGGTGGACGTGCACATGGCCAACTTGCGCGGCAAGTTCCGCGACCTCGACGGCTACGGCATCATCCGCACCGTGCGTG
GCATCGGCTACGCCCTGCGTTCCTGA

Protein sequence : 
MSKRKVLIVEDDPDIARFVRSDLEDAGYEVMHAADAMTGLVTVREQAPDLILLDLGLPDFDGTEVLARVRRTSTLPIIVM
TARDTADEKVSLLEDGADDYVVKPFDSRELIARIGVQLRQHGGAPIEVNGMELNLQQRLVKYNGQEVRLSPTEFNLLALL
ARQPGRVYSREEIEREVWEGRLPANSNVVDVHMANLRGKFRDLDGYGIIRTVRGIGYALRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_007793.3914065.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_002758.1121390.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_010079.5776364.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_002952.2859858.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_007622.3794948.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_003923.1003417.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_013450.8614146.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator NC_002951.3238224.p0 Protein 3e-26 42
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator BAC0197 Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipe_1143 YP_007180468.1 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator VFG0596 Protein 3e-27 41