Gene Information

Name : Deipe_1054 (Deipe_1054)
Accession : YP_007180383.1
Strain : Deinococcus peraridilitoris DSM 19664
Genome accession: NC_019793
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1078050 - 1079393 bp
Length : 1344 bp
Strand : +
Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase

DNA sequence :
ATGGAAGTCGTTACCCGCGTTCCACCCAATTCCAATGACGCCGAAGTGTCGGTACTCGGCTCGATTCTGCTCGACAATGA
CGCCTTCGTGCAGCTTGGTGACACGGTCAGCGCCGACATGTTCTACCGTGAAGGGCACCGCAAAATCTTCACCGCCATGC
GCAGTTTGCAGGAGCGCGGCGAGCCGGTCGATCTCGTGACCCTCACCGAGGAGCTGCGCGTCAAGGGGCAGCTCGACGAG
GTCGGCGGCATGAGCTATCTGATCGGCCTGTCCGAGCACGTGCCGACCAGCGCCTACGTCGAGACGTACGCCCGCATCGT
GCAGGAAAAGCACACCCTGCGCCAGCTCATCAGCGCCAGCGGCAAAGTGATGCAGATGGCCTACGAGGGCAGCCTTCCCC
TGGAGGACCTGCTCGACAAGTCCGAGAAGCTGATTTTCGATGTGGCCGAGCAGAAGCAGTCCGGCGACTTTCAGGAAATG
AGCAGCGTCGTCCACGAAACCTTCGAGTACATCACGCTGCTGCACAACAACAAGGGCATCCCCGACGGTGTGGCCAGCGG
CTTTCGCGACCTCGACGAACAGATCAGCGGTTTGCAGAAGGGCAGCCTCAACGTGCTGGCTGCCCGGCCTTCGATGGGAA
AAACGGCCTTTGCGCTCTCGATTGCCCAGAACGTCGCGCTGCGCAAGGACAAGGCCGTGGTGGTCTTCAGCCTCGAAATG
CCCGCCGTGCAGCTCGCCTTGCGCATGCTGTGCAGCGAAGCCAAGGTGGACATGAACCGCATCCGCTCGGGGCAGCTCAA
CGAGCGTGACTTCGAGCGTCTGGCGATGGCGGCGGGCCGCCTCGCCGAAGCGCCGATGGTGATCGACGATGAGCCCGAGC
TGACCCTCAACGACCTGCGCAGCAAGTGCCGGCGCATCAAGGCACAGCACGGCAACCTGGGCCTGGTGGTGATCGACTAC
CTGCAGCTGATGAGTGGCAGCAAGGGGGGCGGCGGGGGCGAGAACCGCCAGCAGGAAATCAGTACCATTTCGCGTGGCCT
CAAGGGTCTGGCGCGCGAACTCGAAGTGCCGATCATCGTGCTCTCGCAGCTGTCACGTGCCGTCGAGCAGCGCCCCAACC
ACCGACCGATGCTGTCGGACCTGCGTGAATCGGGCGCCATCGAACAGGACGCCGACATTGTGATGTTCATTTACCGCGAC
GAGTACTACAACAAGGAAACTGACCAGCAGGGCATTGCCGAAATCATCATCGGCAAGCAGCGCAACGGGCCGGTCGGCAC
CGTCAAGCTGCAGTTTCACAGCGCGCACGTGCGCTTCAACGACCTCGCGCCGGAGGGCGTGTAA

Protein sequence :
MEVVTRVPPNSNDAEVSVLGSILLDNDAFVQLGDTVSADMFYREGHRKIFTAMRSLQERGEPVDLVTLTEELRVKGQLDE
VGGMSYLIGLSEHVPTSAYVETYARIVQEKHTLRQLISASGKVMQMAYEGSLPLEDLLDKSEKLIFDVAEQKQSGDFQEM
SSVVHETFEYITLLHNNKGIPDGVASGFRDLDEQISGLQKGSLNVLAARPSMGKTAFALSIAQNVALRKDKAVVVFSLEM
PAVQLALRMLCSEAKVDMNRIRSGQLNERDFERLAMAAGRLAEAPMVIDDEPELTLNDLRSKCRRIKAQHGNLGLVVIDY
LQLMSGSKGGGGGENRQQEISTISRGLKGLARELEVPIIVLSQLSRAVEQRPNHRPMLSDLRESGAIEQDADIVMFIYRD
EYYNKETDQQGIAEIIIGKQRNGPVGTVKLQFHSAHVRFNDLAPEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-85 43
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-74 42
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-73 42
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-73 42