Gene Information

Name : Natgr_2311 (Natgr_2311)
Accession : YP_007177936.1
Strain : Natronobacterium gregoryi SP2
Genome accession: NC_019792
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2255309 - 2256823 bp
Length : 1515 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGTCTAGTGACACTGACACCGTCGACGAACGGCGAACCGCTATCCGAACCCGCCATCGTGAAGCGGCCGAAACAGCCCT
TCCTGAACACACCGACCTCTACGTCGGCGGCGAGTTCGTCGTTGCAGACGAGAGAGAGACGTTCGATACCGTCGATCCCA
CGACTGGTGAAGTACTCGAGTCGGTCGCTCGCGGGACAGCGCCAGACGTAGACGCGGCCGTCGACGCGGCGTGGACGGCG
TTCGATGAGACGTGGTCGGAGTTTTCGGCGGGACGACGCCAGCGCGTGTTGACGGCTATCGGCGATACCATCGAGGACCA
CACAGCGGAACTCGCGACACTGGAGAGTCTCGATAATGGGAAGCCGATTTCGGAGGCCAAAGTCGACGTCCGCGGGGCGG
CCGAACAGTTCCGCTTCTTCGCGGGGATCGTCCGAGAGAACTCCGGCGAGACGATGACTGCCGACTCCCGGCACGGCCAG
GTCATCAAAGAGCCCTACGGCGTCGTCGGGCAGATCATTCCGTGGAACTTCCCGCTGTTGATGGCGTCGTGGAAACTCGC
ACCCGCACTCGCAGCCGGCAACTGCTCCGTGCTGAAACCGGCCGAACAGACCCCGCTGTCTGCGCTTCGACTCGCGGAAC
TGATCGACGATGTCGTCCCCGACGGCGTCGTCAACGTCGTTCCCGGGTACGGCGAGGAGGCGGGTGTGGCCGTGTCGGGC
CACCCGGACGTCAGGAAAGTGGCGTTCACCGGGTCGACAGCAGTTGGCAAGCAAGTAATGAAACGTGCAGCCGACACCGT
CACCGACGTGACACTCGAACTCGGTGGCAAGAGCCCCGTCGTCGTCTTCCCAGACGTGAACCCGAAGAAAGCCGTCGCGC
TCGTGCAGTCGGCGATCTTCTACAACACTGGGGAGTGCTGTGAGGCCGGATCACGGCTGTTCGTCCACGAGGACATCGCT
GACGAGGTGCTGGACGGACTGGTCGCCGCGATCGGCGAGATGACCATCGGTGATCCGCTCGACAAAGAGACCGACCTCGG
CCCGAAAGTTTCCCAGAAACAAGTCGACCGGACGCTCGAGTTTCTAGAGTCCGCTCGCGAAGACGGTGGAGAGTTCCTCG
CCGGCGGTGGTCGGCCCGACGACGTACTCGAGGACGGCTGTTACGTCGAGCCGACGCTGATCGAGGGGCTCGATCACGAC
AGCGAACCAGCCCAGGAGGAAATTTTCGGTCCGGTCCTCGACGTGTTCCGCTGGGACGACTACGACGAGATGATCGAACT
CGCAAACGACGTGGCGTATGGTCTCGCCGGTGGCGTCGTCACCGACGACATCACGACGGCGCACACGACGGCTCGAGACA
TCGACGCGGGATACATCTGGATCAACAGTTACCACGACCTCGTTCCCGGGTTGCCGTTTGGCGGCTACAAGCAGTCCGGC
ATCGGCCGCGAGCTGAGTGGCGAGACGCTGGATCACTACCAGCAGACGAAGACGATCAACCTCTCGTTGCGCTGA

Protein sequence :
MSSDTDTVDERRTAIRTRHREAAETALPEHTDLYVGGEFVVADERETFDTVDPTTGEVLESVARGTAPDVDAAVDAAWTA
FDETWSEFSAGRRQRVLTAIGDTIEDHTAELATLESLDNGKPISEAKVDVRGAAEQFRFFAGIVRENSGETMTADSRHGQ
VIKEPYGVVGQIIPWNFPLLMASWKLAPALAAGNCSVLKPAEQTPLSALRLAELIDDVVPDGVVNVVPGYGEEAGVAVSG
HPDVRKVAFTGSTAVGKQVMKRAADTVTDVTLELGGKSPVVVFPDVNPKKAVALVQSAIFYNTGECCEAGSRLFVHEDIA
DEVLDGLVAAIGEMTIGDPLDKETDLGPKVSQKQVDRTLEFLESAREDGGEFLAGGGRPDDVLEDGCYVEPTLIEGLDHD
SEPAQEEIFGPVLDVFRWDDYDEMIELANDVAYGLAGGVVTDDITTAHTTARDIDAGYIWINSYHDLVPGLPFGGYKQSG
IGRELSGETLDHYQQTKTINLSLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-77 46
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-79 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-79 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-79 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-79 44
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-63 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natgr_2311 YP_007177936.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 3e-77 46