Gene Information

Name : Natgr_2285 (Natgr_2285)
Accession : YP_007177910.1
Strain : Natronobacterium gregoryi SP2
Genome accession: NC_019792
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2233833 - 2234714 bp
Length : 882 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCGATAGACTCGAGACTGACCACACGAGACGACGCGGAATCGGCCGCCCCCGAGACGGACGACCCACCGTATCTCAC
CGGTACCGATCTCCGGATCGGCTATCCGAACGCCGAGGAACCGGTCCTCGACGGCGAGTCTGTAACCGTCCCCGAGGGCG
AAGTGACGGCACTCATCGGTCCGAACGGCAGCGGCAAGAGCACGCTCCTGAAAGGGATCGCACGCCAACTTTCGCTCGAG
TCCGGCACCGTCTTTCTCGAGGGCAACGACGTACACGACCTCGAGAAGAAGGCCTTTGCCAGGAAGGTCGGTCACCTCTC
CCAGGAGAACGTCTCGCCCGATGGGTTGACCGTCGCGGAGCTCGTCTATCACGGTCGATACCCACATCGCGGGTTCTTCG
AGTCCGTCACGGACGAGGACCAGGCGGCCGTCGATCGAGCGATTTCGCTTGCGGGTATCGGCCATCTCCGCGACCGGCCT
CTCGGTAGTCTGAGCGGCGGGCAGAAACAACTCGTCTGGATCGCGATGGCGCTGGCCCAGGAGACCGACGTTTTGTTGCT
CGACGAGCCGACCACGTTCCTCGATGTCCACCACCAACTCGAGGTCATGGAGATCGTCGAGACGCTGCGCGATCACAGTT
CGGTGACGGTCGTCCTCGTCCTCCACGACATCGAACAGGCGGCTCGCTATGCCGACCACCTGGTCGCTCTCGAGGACGGC
TCGATTTACGCCAGCGGTCCGCCGGACGACACGCTCACGGAGGCGCTTCTCGCGGACGTGTTCCGTATCGAGGCCGACGT
GGAGGAGGGGGAACGCGGACCGACGATCACGCCGCTTGGGCCGCTTCACGAGGACTCGAGCGACGAGAGCGTCGAACGAT
AG

Protein sequence : 
MAIDSRLTTRDDAESAAPETDDPPYLTGTDLRIGYPNAEEPVLDGESVTVPEGEVTALIGPNGSGKSTLLKGIARQLSLE
SGTVFLEGNDVHDLEKKAFARKVGHLSQENVSPDGLTVAELVYHGRYPHRGFFESVTDEDQAAVDRAISLAGIGHLRDRP
LGSLSGGQKQLVWIAMALAQETDVLLLDEPTTFLDVHHQLEVMEIVETLRDHSSVTVVLVLHDIEQAARYADHLVALEDG
SIYASGPPDDTLTEALLADVFRIEADVEEGERGPTITPLGPLHEDSSDESVER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-49 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-49 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-49 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-49 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-49 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-49 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natgr_2285 YP_007177910.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 8e-50 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natgr_2285 YP_007177910.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 7e-50 45
Natgr_2285 YP_007177910.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 3e-51 43