Gene Information

Name : Natgr_1047 (Natgr_1047)
Accession : YP_007176726.1
Strain : Natronobacterium gregoryi SP2
Genome accession: NC_019792
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1035394 - 1036311 bp
Length : 918 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATCGAGAAACGCGGCCTCGAGACTCGTTTCGAGCGTGAGACCGTTGAGGAACCTGGCTGGGGTCCGGTCTCGGACGA
CGACACGGACACGGGCACCCAAAGCGGACGGAGCGATCACATCGAGTGTCGGGACCTCGTCCTCGAGTACGACACGAGTG
ACGAACCGGTCGTCGACGGTGAGACGATCGGCGTGCCCGACGGGAAGGTGACGGCACTCGTCGGGCCCAACGGTAGCGGC
AAGAGCACGCTCCTGAGAGGTGTCGCACGCGAACTCGAGCCGGCCGACGGTCAGGTCGTCCTCGATGGGACGGACATCGA
GCACTATTCGCGAAAAGCGTTGGCTCGTGAGTTGGGGTTGCTCTCCCAGCACAACGTCGTCCCCGAGTCACTGACCGTCG
AAGACCTCGTCAGACACGGCCGGTATCCACACCGTCGGCTGTTCGATACCATGTCTGACAGCGACTGGCGGGCTGTCGAC
CGGGCGATCGACACGGTCGGAATCGACCACCTCCGCGATCGCGATGTCGGATCGCTCTCGGGCGGACAGACGCAACTGGC
CTGGATCGCGATGGTCCTCGCACAGGAACCTCGGGCAATGTTACTCGACGAACCGACGACCTACCTCGACTTGCGCCACC
AAGTTCGGCTCCTCGAGGTAATCCGGTCGCTGAGCGAGGACGTGGACATGACTGTCGTCGTGGTTCTGCACGATATCTCA
CAGGCGGTCCGGGTCTGTGACCACCTCGTTGCACTCGCGGACGGAGCTGTCTACGACAGCGGACCGCCGGCGGAGGTCGT
CACAGAGGAGTTTATGGCCGAAGTATTCGGCGTCGACGCCCACGTCGAGCCTGGGCCTGCTGGCCTCCAGATACACCCGA
TAGGAGAGAGCGAACAAACAGCAGGCGAAGACGGGTGA

Protein sequence : 
MIEKRGLETRFERETVEEPGWGPVSDDDTDTGTQSGRSDHIECRDLVLEYDTSDEPVVDGETIGVPDGKVTALVGPNGSG
KSTLLRGVARELEPADGQVVLDGTDIEHYSRKALARELGLLSQHNVVPESLTVEDLVRHGRYPHRRLFDTMSDSDWRAVD
RAIDTVGIDHLRDRDVGSLSGGQTQLAWIAMVLAQEPRAMLLDEPTTYLDLRHQVRLLEVIRSLSEDVDMTVVVVLHDIS
QAVRVCDHLVALADGAVYDSGPPAEVVTEEFMAEVFGVDAHVEPGPAGLQIHPIGESEQTAGEDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-44 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-49 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-49 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-43 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 6e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natgr_1047 YP_007176726.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 4e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natgr_1047 YP_007176726.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 4e-44 46
Natgr_1047 YP_007176726.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 8e-51 44