Gene Information

Name : Calag_0873 (Calag_0873)
Accession : YP_007175062.1
Strain : Caldisphaera lagunensis DSM 15908
Genome accession: NC_019791
Putative virulence/resistance : Unknown
Product : P-type ATPase, translocating
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 865816 - 867933 bp
Length : 2118 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
TTGAGTGAAACAACTAGGTACCATGAAAAATATAATTTGAAGAAAATATTTATTGATTCCATATTAAAGTTAAATCCTGT
ATATTTAGCAAAAAATAACCCAGTTATGTTTGTAGTTGTTTTGGGATTCATAGTTACTTTGCTTATGATCGTGTTACCAA
ATCAAATTCCAGCTAATCAAATAAACTTTTATATAGCAGTTTCTTTAACATTGTTTTTTGCAGCATGGTTTTCAACATTT
TCAGAAGCGTTTTCAGAATATGAAGCAAAGGCAAGGGTTGATTCATTAAAAATTTTTGAAAAAGAAATAATTGCCCATAA
GCTTGTTAACGATCATTATGTCGATGTTAAATCTAACAATCTTAAGCCAGGGGAGAGAATTTTAGTTAAAAAAGGAGAGA
TAATTCCTATCGATGGTTTTATTATTGACGGATCTTCATATATTGATGAATCAATGATAACAGGGGAATCGGAACCTGTC
TTTAAGAATAAGGGTGATCACGTCATAGGAGGAACTAAAGTTATTGAGGGAGAATTAAAAATAGAGATAACTGCTGAAAG
AGGCAGAAGTTTTATTGATAAGATGATTTCCTTAGTTTCTCAAGCAAAAAGACCTAAATCACAAAGTGAGATTTCATTAA
ATATTTTATTGTCTGGCTTATCGTTAATATTTTTAATTGTAACAGCAACACTTTATTATATTTTAAAGTCATTGGGATAT
AGTTATGTTAATATAGCCCTAATAATTGCATTACTGGTAGCATTAATGCCAACAACCATTGGTGGATTGTTACCTGCTAT
TGGTATTTCTGGTATATCAAGATTAACAAGAGATAATATAATAGCAAAGTCAGGAAAAGCGATCGAGGCTGCTAGCGATG
CCGATGTTATTCTCTTAGATAAAACTGGTACTATAACAGAAGGAAATAGGGCAGCAGTAGAATTTATTCCCCTAGACAAT
TTTGATGTAAATTGTGTTGCTGTAGCATCTTATTTGGCCTCATTTAATGATAACACAAGAGAAGGGAGATCTATAATTGA
TTTGATAGAAAGTATGAAAATAAGGATACCAAACGAAATAATAGATGTTGCTTTAATGTCTAAACCCATTGAATTTAATA
TAAATACAAGATATTCTGGTATAGAGATATCACGACCTAATAAATTATTAGATTATATAAAAAAGGATAAGACATGCCTT
AAATTAGTTGAAATTATAGAAGAATATGGAAATAAAAATGAAGAAATAAAAATATTAAAAGGGGCTGTTGATTCCTTAAT
CAAAAACGTTAAAAATGTGAAGAAGGAAGTTATAGATAAAATAGTAGAAGATGTTGGGAAAAAAGGAGAAACACCATTGC
TTTTAATTATTAATGAAAAAGCTATGGGTATAATTGTGTTAAAAGATAGATTAAAACCTGGTATAAAGAACGTTATATCT
GATTTAAAGATAATGGGAATAACCCCAATAATGGTTACGGGCGATAATCCACTAACAGCGAAGGTAATTGCTACAGAGGC
TGGTATTGATAATGTTATTTCTCAGGCAAAACCTGTAGATAAGCTAAATAAAGTTCATGATGAGCAGAATAAAGGACATG
TTGTCATAGCAATGGGAGATGGTACAAATGACGCCCCAGCTTTAGCTAAGGCTGACGTAGGAGTTGCTATGAATTCTGGA
ACAAGAGCTGCTAAAGAGGCAGCTAATATGATCGATTTAGATTCAAATCCATCGAGGGTTGTAAAAATAATAGAACTTAG
TAAACAATTGTTAGTAACTAGAGGGGCAATAACAACGTTTAGTATAGCTAATGATATTTCAAAATATTTTACAATTTTAC
CAATGATATTAATATTAGGAAACCCAAAAATTGGTTATTTAAACATTTTGCATTTAACTACACCTCAAACAGCAATATTA
GCAACAATGATATTCAACGCTATAATAATTCCTTCATTGATTCCATTAGCTTTAAGAGGCGTTAAATATAAACCAGAATC
TCCTAGGAAGACGTTTATTAGGAACTTTTTGATTTATGGCATTGGAGGTGCATTGCTTCCATTTGCTGCAATAAAATTGA
TTGATATTATATTAGCTATTTTAATGGGTGTTAAGTAA

Protein sequence :
MSETTRYHEKYNLKKIFIDSILKLNPVYLAKNNPVMFVVVLGFIVTLLMIVLPNQIPANQINFYIAVSLTLFFAAWFSTF
SEAFSEYEAKARVDSLKIFEKEIIAHKLVNDHYVDVKSNNLKPGERILVKKGEIIPIDGFIIDGSSYIDESMITGESEPV
FKNKGDHVIGGTKVIEGELKIEITAERGRSFIDKMISLVSQAKRPKSQSEISLNILLSGLSLIFLIVTATLYYILKSLGY
SYVNIALIIALLVALMPTTIGGLLPAIGISGISRLTRDNIIAKSGKAIEAASDADVILLDKTGTITEGNRAAVEFIPLDN
FDVNCVAVASYLASFNDNTREGRSIIDLIESMKIRIPNEIIDVALMSKPIEFNINTRYSGIEISRPNKLLDYIKKDKTCL
KLVEIIEEYGNKNEEIKILKGAVDSLIKNVKNVKKEVIDKIVEDVGKKGETPLLLIINEKAMGIIVLKDRLKPGIKNVIS
DLKIMGITPIMVTGDNPLTAKVIATEAGIDNVISQAKPVDKLNKVHDEQNKGHVVIAMGDGTNDAPALAKADVGVAMNSG
TRAAKEAANMIDLDSNPSRVVKIIELSKQLLVTRGAITTFSIANDISKYFTILPMILILGNPKIGYLNILHLTTPQTAIL
ATMIFNAIIIPSLIPLALRGVKYKPESPRKTFIRNFLIYGIGGALLPFAAIKLIDIILAILMGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 8e-101 44
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 7e-101 44
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-100 44
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-100 44
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-100 44
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-100 44
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-93 43
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-92 43