Gene Information

Name : Deipe_4426 (Deipe_4426)
Accession : YP_007174204.1
Strain :
Genome accession: NC_019790
Putative virulence/resistance : Unknown
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 36575 - 37192 bp
Length : 618 bp
Strand : -
Note : PFAM: Resolvase, N terminal domain

DNA sequence :
ATGCCCGGAACCCTCATCGGCTACGCCCGCGTCAGTACTGACGACCAGACCACTGATCTTCAACTCGACGCCCTCAAGGG
AGCCGGAGTCCTCAAGGTCTACCAGGAGACGGCCAGCGGCGGCCGCTGGGACCGCCCGGAACTTCACCGCATGCTGGAGT
TCCTGCGCGAAGGTGACATCGTGGTCGTCTGGAAGGTCGACCGGCTTTCACGCAGCCTCGCCGACCTCGTCCGCATCATG
GAAATGATCAAAGCACGCGGAGCAAGGCTCAAATCCCTTACCGAGCCCATCGACACCAGTACCCCCGCCGGGGAAGCGAT
GATGCAACTCATCGGGGTATTCGCACAGCTGGAACGCGCCAACTTGCGCGAACGCACCCACGCCGGAATCAAGGCCGCGC
GCGCCAAAGGCGTGAAGTTCGGCCGACCCAGCAAGCTCAGCGAAGCGCAACGCCAAGACATCATCCGGCGGGTCAGCGCG
GGCGACCTCACCGCCGCGGAAGCGGCCCGCCTGTACGGCGTGAACCCCACCACAATCGCGCGTGTCATCAAACGACACCG
CGCCATGACAGTCCCTTTCGAAGGTCGTGCTGCTGAGGTCAGAGGGACTCGCCCGTGA

Protein sequence :
MPGTLIGYARVSTDDQTTDLQLDALKGAGVLKVYQETASGGRWDRPELHRMLEFLREGDIVVVWKVDRLSRSLADLVRIM
EMIKARGARLKSLTEPIDTSTPAGEAMMQLIGVFAQLERANLRERTHAGIKAARAKGVKFGRPSKLSEAQRQDIIRRVSA
GDLTAAEAARLYGVNPTTIARVIKRHRAMTVPFEGRAAEVRGTRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGK06966.1 resolvase Not tested SGI1 Protein 2e-23 45
res AGK07012.1 resolvase Not tested SGI1 Protein 2e-23 45
res AAK02044.1 resolvase Not tested SGI1 Protein 2e-23 45
res AGK07070.1 resolvase Not tested SGI1 Protein 2e-23 45
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 2e-23 45
res AGF34985.1 resolvase Not tested SGI1 Protein 2e-23 45
res AGF35025.1 resolvase Not tested SGI1 Protein 2e-23 45
res AGF35059.1 resolvase Not tested SGI1 Protein 2e-23 45
res AGK06929.1 resolvase Not tested SGI1 Protein 2e-23 45
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-21 43
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 1e-18 42
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 9e-22 42
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 9e-22 42