Gene Information

Name : Deipe_4358 (Deipe_4358)
Accession : YP_007174147.1
Strain :
Genome accession: NC_019789
Putative virulence/resistance : Unknown
Product : proline/glycine betaine ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 524490 - 525419 bp
Length : 930 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGACGTCAATCGAGCTGCACCAACTGGACAAACAGTACGGAAGCGTATACGCGGTTCGCGACCTGACCCTGCACTTCCC
GGAGGGACGCATCACGGCGCTGCTGGGCCCCTCGGGGTGCGGGAAAACCACCACGCTGCGCATGATCAACCGCTTGGTGG
AACCCACGGGTGGGCGGGTGCTGCTCGGCGGACGCGACACGCGCGAACTCAAGGGTGAGGAACTGCGCCGCAACATGGGG
TACGTCATCCAGCAGGTAGGCCTGTTTCCGCATTACTCCGTCGCGCAGAACATCGCGACCGTCCCGCAACTGCTCGGCTG
GGACCGTGCGCGAATCACCCGGCGCGTGGATGAACTCCTCGACCTGGTCGGCCTGCCCCCTGACGAATTCCGCTTGAAAC
GACCCGCTCAACTGTCTGGCGGGCAGGCCCAACGCGTCGGGGTGGCGCGCGCCCTGGCCGCCGACCCGCCGGTCCTGCTG
ATGGACGAGCCGTTCGGGGCGCTCGATCCCATCGCCCGCGAGCGGGTTCAGGACGAGTTCCTTGCCATTCAACGGCAACT
GCACAAGACGGTTGTGCTGGTCACCCACGATCTCGATGAAGCCTTACGCCTCGGGGACTACATCGCCCTGATGCACGCCG
GTCAACTCGCGCAGTTCGGCACGCCCGACGAACTGGTCCTCACGCCTGGCAGTCCCTTCGTGGAACGCTTCCTGGGAGAC
GACGCGCACATCCGGCGCTTGGCGCGCAAGACGGTGCGGGACTTGATGAGCCACGAACGCGCCAGCACTGCTGGTCCGGG
GATCGACGTGAACACCAACGCTCGCACCGCCCTGGCCTGGATGCTCCGCGAGGGCGTCGCGGAACTGCGCGTGATGGAAG
GCGAGCGCACCGTGGGTCGCTTGACCCTGCGTGACCTGGGAGGGGCGTGA

Protein sequence :
MTSIELHQLDKQYGSVYAVRDLTLHFPEGRITALLGPSGCGKTTTLRMINRLVEPTGGRVLLGGRDTRELKGEELRRNMG
YVIQQVGLFPHYSVAQNIATVPQLLGWDRARITRRVDELLDLVGLPPDEFRLKRPAQLSGGQAQRVGVARALAADPPVLL
MDEPFGALDPIARERVQDEFLAIQRQLHKTVVLVTHDLDEALRLGDYIALMHAGQLAQFGTPDELVLTPGSPFVERFLGD
DAHIRRLARKTVRDLMSHERASTAGPGIDVNTNARTALAWMLREGVAELRVMEGERTVGRLTLRDLGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-50 52
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-50 52