Gene Information

Name : Deipe_3852 (Deipe_3852)
Accession : YP_007173721.1
Strain :
Genome accession: NC_019789
Putative virulence/resistance : Virulence
Product : Fe3+-hydroxamate ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 23289 - 24191 bp
Length : 903 bp
Strand : +
Note : PFAM: Periplasmic binding protein

DNA sequence :
ATGCACAAACTGCTCGTGACCACCCTGCTCGCCCTTCCCGGTGGCGCCCTCGCCCAAGACGCGAACTGCGAAGGCCGCCT
GATCAAGCACGCGATGGGCGACACCTGCGTCCCGCAAACCCCCAAACGCGTCGTTGTGCTCGACACCGGTGAACTCGACA
GCACCCTCGCCCTCGGCGTGAAACCCATCGGCGCCGTCACCGCCCTCGGCGCCGGCTTCCCCAGCTACCTCAAAGGCAAA
ACCGACGGCATCACCGACGTCGGTACCATCGCCCAACCCAACCTCGAAAAAATCCTCGCCCTGAAACCCGACCTGATCCT
CACCAGCAAAATTCGCCACGGCAACATCTACGAGCAACTCAGCAAAATCGCCCCAACTGTCATGGCAGAAACCGTCGGCG
TCGTCTGGAAGGACAACCTCAAACTCAACGCGAAAGCCCTTAACCGCGAAGCCCAGGCGAACAAACTCCTCAGCAATTAC
TACGCGCGCGCGAAGAAACTCCAGGCAGGCCTCGGTCGGGACCGACTCAACACCGAGGTGTCCATTGTGCGCTTCGTGCC
CGGCCAGACCCGCCTGCAACAGAAAGCCAGTTTTATCGGCACCATTCTGGAGGACGCCGGCCTCAAGCGCCCGAAATCGC
AGGACAAGGACGCTTTCATGGAAGTCGCCACGCCCGAACGCATTCCGGACATGGACGGCGGCGTGCTGTTCTACAGCACG
TACGGACCGGCGCAGCAGACCGATCAGCAGCTGTACCTGCAGCACCCCTTGTGGAAGCGCCTGAACGTCGTGAAGGAAGG
CCGGGTGCATGCGGTAAATGACGATTACTGGTTCCTCGGCATCGGTGTGATCGCCGCAAACAAAGTCCTCGACGACCTCG
AACAACACCTCGGAAAACGCTGA

Protein sequence :
MHKLLVTTLLALPGGALAQDANCEGRLIKHAMGDTCVPQTPKRVVVLDTGELDSTLALGVKPIGAVTALGAGFPSYLKGK
TDGITDVGTIAQPNLEKILALKPDLILTSKIRHGNIYEQLSKIAPTVMAETVGVVWKDNLKLNAKALNREAQANKLLSNY
YARAKKLQAGLGRDRLNTEVSIVRFVPGQTRLQQKASFIGTILEDAGLKRPKSQDKDAFMEVATPERIPDMDGGVLFYST
YGPAQQTDQQLYLQHPLWKRLNVVKEGRVHAVNDDYWFLGIGVIAANKVLDDLEQHLGKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 1e-56 46
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-56 46
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 1e-56 46
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-56 46