Gene Information

Name : Dacsa_0673 (Dacsa_0673)
Accession : YP_007170795.1
Strain : Dactylococcopsis salina PCC 8305
Genome accession: NC_019780
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 691841 - 694222 bp
Length : 2382 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTTGAATATTTTACAGATAAAGCGATTAAAGCAGTGGTTCTCGCACAAGAGGAAGCTCGTCGTATGAAACAAAACCT
AGTGGGAAGCGAACAAGTGCTATTAGGTTTAATTGCGGAAGCAAGCAGCGACGCAGCAAAACTGCTAAATCAAATGGGAG
TCAAGCTGAAAGATGCTCGTCAAGTGGTAGAAGGATTAGTGGGATCAGGATCAGGGAATGTTCCCTCGAATATCCCTTTC
ACCCCACGCGCCAAACGAATTTTTGAGCAAGCGCTGGAAATTGCTCGTCAACGCTCCCATGAGTCAATTTTACCCGAACA
CATTTTGCTTGCCATGACTCGTGAAGAGGGAGTCGCCACCAAAGTTTTAAGCCAGCTTGGGGTTGATCCGAAACAGGTGG
CGAATGGTTTAGAGGAATCTCTCGATAATCCCAGTTCTGGAGATGATGAACCCGCCGCACCCGCAACCGCTAGTATGGGA
GAACGTCGTCAACGTGGATTTGGCTTCAATCCTCAGCAACAGGGAGAAGGAGGCTTAAAATCCTATGCGGTGAATCTCAC
CGATCGCGCTCAAAATGACGAAATCGACCCCATTATCGGACGGGATCAAGAAGTAGAGCGTACCATCCAAATTTTAGGTC
GTCGCACCAAAAATAATCCTGTATTGGTGGGAGAACCGGGGGTGGGAAAAACCGCGATCGCGGAAGGATTAGCACAACGA
ATCGCACGGAAAGACGTTCCAGAAACCCTACACGACAAGCAAGTTTACAGCTTAGACATGGGGTTATTAATTGCGGGGAC
TCGTTTCCGAGGCGAATTTGAAGAACGCCTCAAAGGCATTGTCAAAGAAGTCCAAGAAGCAGGGAATATCATCTTGGTTA
TTGATGAAATTCACACCCTGATCGGCGGTGGCGCAATGGAAGGCGGTATGGATGCCGCTAACTTGCTAAAACCTGCTTTA
GCTCGTGGGGAATTACAATGTGTGGGAACAACCACCATGGATGAGTATCGTCAATACATTGAAAAAGATGCGGCGTTAGA
GCGACGGTTTCAACCCGTGATGGTCGATGAACCCTCCGTAGAACAGACGATCGAGATTTTAGAGGGCATCCGCAAGCCTT
ATGAGGAGTACCACAAAGTAACCATCTCCCCAGAAGCGTTAGAAGCGGCGGCGAAACTTTCCGATCGATACATTAACGAT
CGACAGCTTCCCGACAAAGCCATTGATTTAATTGATGAAGCCGGATCAAGATTACACTTAAATCACTCCCTAGCGGAAAA
ATCCAGTGATGAAACCGAAAAAGCCAAACTCAGCGCCGAAACCCCTGTTGTCGGATTAGAAGAAGTGGCGGCGATCGTGT
CTTCTTGGACAGGCGTTCCCGTCACGAAAATGACCCAAGCTGAGTCAGAAGTGCTGTTAAATCTAGAGGGAACGCTCCAT
GAACGGATTATTGGACAAAGTGAAGCAGTGAGTGCGGTTTCACGAGCAATTCGTCGCGCTCGTGTGGGAATGAAAGATCG
CGATCGCCCGATCGCCAGCTTTATCTTTTCCGGTCCCACAGGAGTCGGAAAAACGGAATTAACCAAGGCTCTAGCTCAAT
ATCTCTTCGGCGACGAAGAAGCCATGATTCGTCTCGATATGTCCGAATATATGGACCCCCAAAGTGTCTCGAAGTTAATC
GGTTCGCCACCAGGATTTGTTGGCTACGAGGAAGGCGGACAACTCACGGAACAAATCCGCCGTCGTCCTTATACAGTGGT
ACTGTTTGATGAGATTGAAAAAGCTCATCCTGATGTGTTTAACTCCATGCTGCAGATTTTGGATGAAGGTCATCTTACCG
ATGCGAAAGGGCGACAAGTTGACTTCAAAAATACCTTGCTCATTATGACCTCTAACATCGGTTCTAAAGCGATCGAAAAA
GGTGGCGGTGGACTTGGTTTTGAGTTAAACGAAGAAGGAGAAGGAAGCTATACTCGCATCCGAAACCGTGTCCAAGAAGA
AATGAAGAACTATTTCCGTCCTGAGTTTCTCAATCGAGTGGATGAAGTGATTGTCTTCCGTCAATTACAGAAAGAAGAAG
TGGGCGAAATCGCCGATTTACTCCTGAAAGAAATTTCCACTCGTCTCCAAGATCAGCAAGGTGTCGAGTTAAAAGTCAGT
GATGGCTTTAAAGATCGCGTCATTAATGAAGGCTATGATGCCAGTTATGGCGCTCGTCCCCTCAGACGAGTCTTAATGCG
TCTTTTAGAGGATAACTTAGCACAGGCGATTCTCTCTGGAGAACTCAGTGAAGGCGATACCGCCTATGTGGATACGGATG
AAGACGGTAACATTCTGATCACTGACGCGGCGAAGAAAAAACAATTGCAACCCGTCGGTTAG

Protein sequence :
MFEYFTDKAIKAVVLAQEEARRMKQNLVGSEQVLLGLIAEASSDAAKLLNQMGVKLKDARQVVEGLVGSGSGNVPSNIPF
TPRAKRIFEQALEIARQRSHESILPEHILLAMTREEGVATKVLSQLGVDPKQVANGLEESLDNPSSGDDEPAAPATASMG
ERRQRGFGFNPQQQGEGGLKSYAVNLTDRAQNDEIDPIIGRDQEVERTIQILGRRTKNNPVLVGEPGVGKTAIAEGLAQR
IARKDVPETLHDKQVYSLDMGLLIAGTRFRGEFEERLKGIVKEVQEAGNIILVIDEIHTLIGGGAMEGGMDAANLLKPAL
ARGELQCVGTTTMDEYRQYIEKDAALERRFQPVMVDEPSVEQTIEILEGIRKPYEEYHKVTISPEALEAAAKLSDRYIND
RQLPDKAIDLIDEAGSRLHLNHSLAEKSSDETEKAKLSAETPVVGLEEVAAIVSSWTGVPVTKMTQAESEVLLNLEGTLH
ERIIGQSEAVSAVSRAIRRARVGMKDRDRPIASFIFSGPTGVGKTELTKALAQYLFGDEEAMIRLDMSEYMDPQSVSKLI
GSPPGFVGYEEGGQLTEQIRRRPYTVVLFDEIEKAHPDVFNSMLQILDEGHLTDAKGRQVDFKNTLLIMTSNIGSKAIEK
GGGGLGFELNEEGEGSYTRIRNRVQEEMKNYFRPEFLNRVDEVIVFRQLQKEEVGEIADLLLKEISTRLQDQQGVELKVS
DGFKDRVINEGYDASYGARPLRRVLMRLLEDNLAQAILSGELSEGDTAYVDTDEDGNILITDAAKKKQLQPVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-177 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_0673 YP_007170795.1 chaperone ATPase VFG0080 Protein 3e-137 50
Dacsa_0673 YP_007170795.1 chaperone ATPase VFG0079 Protein 0.0 49