Gene Information

Name : Dacsa_0514 (Dacsa_0514)
Accession : YP_007170655.1
Strain : Dactylococcopsis salina PCC 8305
Genome accession: NC_019780
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 532631 - 533389 bp
Length : 759 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGATGCCTCGAATCCTTGTTATTGATGATGATCCCGCCATTTCCGAACTGGTGACAATCAACCTTGAAATGGCTGGTTA
CACCGTAGAACCTGCCAATGATGGCATTAAAGGTCAAGCCCTCGCAGTACAACTGCAGCCAGACTTGATTATGCTTGACT
TAATGCTCCCCCGTGTGGATGGCTTAACCGTATGCCAAAGACTGCGACGTGATGAGCGCACCGCAGATATTCCCGTCTTA
ATGTTGACGGCTTTAGGGCAAACCCAAAATAAAGTAGAAGGGTTTAATGCTGGTGCCGATGACTATCTCACTAAACCTTT
TGAGGTGGAAGAGATGTTAGCACGAGTCCGCGCTTTACTTCGTCGCACCGATCGGATTCCCAAAGCCGCGAGACACAGTG
AGATCCTCAATTATGGTCCCTTGACCTTAGTTCCCGAACGGTTTGAAGCCATCTGGTTTGGAAAAACCGTCAAACTCACC
CATCTTGAGTTTGAACTGCTGCACTGCTTACTGCAACGTCATGGACAGACCGTTTCTCCCAGTGACATCCTGAAAGAAGT
GTGGGGATATGATCCTGATGATGACATTGAGACAATTCGAGTCCATATTCGTCATCTTCGCACCAAACTCGAACCAGAAC
CCCGTCATCCTATGTATATTAAAACCGTTTATGGGGCGGGATACTGTTTAGAATTGCCCGATGAAGGGAAAGCCATGGCG
CAACAGGACAATTCAGCAGCTTTAGAAGAACATAAATAA

Protein sequence :
MMPRILVIDDDPAISELVTINLEMAGYTVEPANDGIKGQALAVQLQPDLIMLDLMLPRVDGLTVCQRLRRDERTADIPVL
MLTALGQTQNKVEGFNAGADDYLTKPFEVEEMLARVRALLRRTDRIPKAARHSEILNYGPLTLVPERFEAIWFGKTVKLT
HLEFELLHCLLQRHGQTVSPSDILKEVWGYDPDDDIETIRVHIRHLRTKLEPEPRHPMYIKTVYGAGYCLELPDEGKAMA
QQDNSAALEEHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-31 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-30 41
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 4e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 4e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 5e-40 42
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF310956.2.orf0.gene Protein 7e-32 41
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene2255. Protein 6e-31 41
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain U35369.1.gene1.p01 Protein 6e-31 41
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 4e-40 41
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 1e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 3e-37 43
Dacsa_0514 YP_007170655.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 1e-27 41