Gene Information

Name : Dacsa_1965 (Dacsa_1965)
Accession : YP_007171970.1
Strain : Dactylococcopsis salina PCC 8305
Genome accession: NC_019780
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1990173 - 1991978 bp
Length : 1806 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGGAACTGCAAAATTCATCCCGTCGAACGAAAATTGTTGCTACCGTTGGTCCTGCAACCCTAAAACCTGATGTGTTGAG
AGACTTAATTAAAGCTGGCGCGACCACCCTGCGGCTCAATTTTTCTCATGGAACGCAAGAAGATCACCAAAGTAGCATTC
GTTTAATTCGTCAAACCGCCTTTGAATTAAATCAACCGGTGGCGATTCTACAAGATTTACAAGGACCGAAAATTCGCTTA
GGCAAATTTGAAAACGGTTCGATTACCCTTGCTAAAGGTGATCCATTTATTTTGACCAGTCATCCCATGACCGGAACCCA
AGAAAAAAGTTATGTCAGTTATGACTTATTAGCGGAGGAAGTTCCCGCCGGCGCAACCATTTTGTTAGATGATGGTCGGG
TGGAGATGCAGGTAGAGGCGGTTTATCCAGAGAAAAAAGAAGTTCATGGTCGCGTGGTTGTGGGAGGTGAGCTTTCTAAT
AATAAAGGGGTGAATTTTCCAGGAGTTTATTTGTCGGTTCGTGCTTTAACTGACAAAGATCGTCGCGATTTGATGTTTGG
CTTAGATCAAGGGGTAGATTGGATCGCGTTGAGTTTTGTCCGTAATCCCCAAGATGTTTTAGAGATTAAAGAGATTATTT
CCAGTGCGGGTAAATCGGTTCCCGTTATTGCCAAAATTGAAAAACACGAGGCGATCGAGCAGATGGAAGCGGTGTTATCC
CTTTGTGACGGGGTAATGGTGGCTCGTGGGGATTTAGGCGTTGAACTCCCCGCCGAAGATGTTCCCATTCTACAAAAGCG
TTTAATTCAAACCGCCAATCGTCTCGGTATTCCCGTCATTACTGCTACTCAAATGTTAGACAGTATGGCAAATAATGCCC
GTCCTACCCGTGCAGAAGTTTCCGACGTTGCGAACGCCATTTTAGACGGCACAGATGCGGTGATGCTTTCTAATGAGACG
GCGGTGGGGAAATATCCCGTAGAAGCAGTGGCAACCATGGCGCGAATCGCCGATCGCATGGAAAGAGAAAAACCCACGCC
CTCAGACAAATTAGATACGACTCGCACGATTCCCAACGCCATTTCCAGCGCCGTGAGTCAGATTTCCCGCCAGTTAGATG
CGGCGGCAATTATGACCTTAACCAAAACTGGCGCAACAGCACGAAATGTGTCTAAATTCCGTCCCCAAACCCCAATTTTA
GCGGTTACGCCTCATGTGGATGTTGCGCGTCAATTACAACTGGTGTGGGGTGTGAATCCCTTGTTAGTGTTAGATTTGCC
TTCAACTGGACAAACCTTTAAAGCCGCGTTAAATGTCGCCCAAGAAAAAGGCTTAGTTTCTGATGGGGATTTAGTGGTAA
TGACCGCAGGCACATTACAAGGCGTTGCTGGATCAACAGACTTGATTAAAGTGGAAGTCGTAACCGCAGTTTTAGGTCGT
GGTGTCGGCATTGGTCACGGAACAGTGAGTGGTCGCGCTCGTGTGGCGAAAAGTGCGCGAGAGGCGGGAAATTTCCGTCC
AGGGGAGATTTTGGTTGTTCCCCATACCGATGCGGATTATGTGGAAGCGATTCGCAAAGCAACGGGAATTATTACCGAAG
AAGGCAATCTCACCAGCCATGCGGCAGTCATTGGCTTACGTTTGGGCATTCCAGTTATTGTAGGATTTGAAGGGGCAACC
CAGACCATTCGAGAAGGTGCAATTTTAACCCTAGATAGTCAGCGCGGTTTAGTCTTTTCTGGTGCGGTTTCCGCCGGTGG
ACAATTTAACGAAAATGCTGGCACTGGTGTTCCTTTGCCTTCTTAG

Protein sequence :
MELQNSSRRTKIVATVGPATLKPDVLRDLIKAGATTLRLNFSHGTQEDHQSSIRLIRQTAFELNQPVAILQDLQGPKIRL
GKFENGSITLAKGDPFILTSHPMTGTQEKSYVSYDLLAEEVPAGATILLDDGRVEMQVEAVYPEKKEVHGRVVVGGELSN
NKGVNFPGVYLSVRALTDKDRRDLMFGLDQGVDWIALSFVRNPQDVLEIKEIISSAGKSVPVIAKIEKHEAIEQMEAVLS
LCDGVMVARGDLGVELPAEDVPILQKRLIQTANRLGIPVITATQMLDSMANNARPTRAEVSDVANAILDGTDAVMLSNET
AVGKYPVEAVATMARIADRMEREKPTPSDKLDTTRTIPNAISSAVSQISRQLDAAAIMTLTKTGATARNVSKFRPQTPIL
AVTPHVDVARQLQLVWGVNPLLVLDLPSTGQTFKAALNVAQEKGLVSDGDLVVMTAGTLQGVAGSTDLIKVEVVTAVLGR
GVGIGHGTVSGRARVAKSAREAGNFRPGEILVVPHTDADYVEAIRKATGIITEEGNLTSHAAVIGLRLGIPVIVGFEGAT
QTIREGAILTLDSQRGLVFSGAVSAGGQFNENAGTGVPLPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-85 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-85 43
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-85 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-85 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_1965 YP_007171970.1 pyruvate kinase VFG0479 Protein 1e-85 43