Gene Information

Name : Dacsa_1573 (Dacsa_1573)
Accession : YP_007171608.1
Strain : Dactylococcopsis salina PCC 8305
Genome accession: NC_019780
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1585573 - 1586253 bp
Length : 681 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCACATTTTGTTAGTGGATGATGAACGAGAATTGACAACACCGCTTTCTCGTGTTTTAACTGAGGAAGGATATCAGGT
TGATGTGGCAAATAATGGGGTGCTGGGAGAAGAATTAGCAGGAAAAAATAATTATCATCTGTTAATTTTAGATTGGTTAA
TGCCAGAAAAATCGGGAATTGAATTATGTCGAAATCTTCGATCGAGCGGTGATCAAACACCCGTTTTATTTTTAACCGCA
AAAGATACAGTGGACGATCGAGTAGAAGGATTAGATGTTGGTGCGGATGATTATATTGTTAAACCGTTTGAATTGCGAGA
ATTTTTAGCCAGAGTGAGAGCGTTATTAAGACGATCGGCTTGCGAAATTTCGGCAACTTCTCGCTTGCAATTTGGAGAAT
TAGAACTCGATCGAGACAATCAACTCGCCTATCGCAATGGGAGGACGATCGAACTTTCAGAAAAGGAAACCCAGTTATTA
AGCTATTTAATGCAATTTCCCGAACAACTGTTAACCCATCAACAAATTTATCAACATCTTTGGGGAGAAGATAGCACTCC
TAGTAGTAACGTTTTAGCCGCTTTAGTGCGTTTATTACGCCGTAAAATTGAAGCCCCTGGAGAAACAACCCTAATTCATA
CTGTTTATGGAAAAGGTTATCGTTTGATGAATGATGAATAA

Protein sequence : 
MHILLVDDERELTTPLSRVLTEEGYQVDVANNGVLGEELAGKNNYHLLILDWLMPEKSGIELCRNLRSSGDQTPVLFLTA
KDTVDDRVEGLDVGADDYIVKPFELREFLARVRALLRRSACEISATSRLQFGELELDRDNQLAYRNGRTIELSEKETQLL
SYLMQFPEQLLTHQQIYQHLWGEDSTPSSNVLAALVRLLRRKIEAPGETTLIHTVYGKGYRLMNDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0288 Protein 4e-25 44
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 1e-27 43
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 6e-25 43
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 1e-23 42
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 1e-24 42
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 6e-19 42
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 3e-27 41
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 2e-26 41
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 8e-22 41
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 1e-13 41
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 2e-13 41
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 1e-13 41
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 2e-13 41
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 1e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-31 47
Dacsa_1573 YP_007171608.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 9e-25 41