Gene Information

Name : Dacsa_1571 (Dacsa_1571)
Accession : YP_007171606.1
Strain : Dactylococcopsis salina PCC 8305
Genome accession: NC_019780
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1584315 - 1584989 bp
Length : 675 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGTGGCTCGAATTTTAATTGTGGAAGATGAAGCCAAACTCGCCCAATTTATTGAGTTAGAACTTCAATATGAAGGGTA
TGAGGTGACGATCGCCACTGATGGCTTCACTGGATTAACCCAAGCGCGAGAACTCAATCCCGATTTACTGATCCTCGATT
GGATGTTACCTGGCATTTCTGGGTTAGAAATTTGTCGGCGGTTACGTCAAACCAATAACACCATTCCTGTGATTCTATTA
ACGGCAAAGGATGAGATTAGCGATCGAGTGGAAGGGTTAGACGCGGGGGCTGATGATTATGTGGTGAAACCCTTTAGCAT
TGAAGAATTATTTGCCCGTGTTCGCGCCCATCTTCGCCGCAACCACGAGGAAGAAACGGACACTTTCCAGTTTAGCGATC
TTAAACTCAATACTAGCACCAGAGAAGTTTGTCGGCGCGATCGCGCGATCGAATTAACCGCAAAAGAGTTTGAATTACTG
CGTTATCTTCTCCTCCATCCCCGTCAAGTGTTAACCCGTGACCAAATTTTAGAACGAGTTTGGGGATATGATTTTATGGG
AGATTCCAACATTATTGAAGTTTATATTCGTTATTTAAGATTAAAATTAGAAGAAAAAGGAGAACCTCGCATCATTCAAA
CCGTGCGCGGTGTCGGTTATGTTTTACGAGAGTAA

Protein sequence :
MVARILIVEDEAKLAQFIELELQYEGYEVTIATDGFTGLTQARELNPDLLILDWMLPGISGLEICRRLRQTNNTIPVILL
TAKDEISDRVEGLDAGADDYVVKPFSIEELFARVRAHLRRNHEEETDTFQFSDLKLNTSTREVCRRDRAIELTAKEFELL
RYLLLHPRQVLTRDQILERVWGYDFMGDSNIIEVYIRYLRLKLEEKGEPRIIQTVRGVGYVLRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-35 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-34 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 6e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-44 51
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 8e-48 50
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 1e-45 49
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 5e-41 47
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 6e-43 46
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 1e-41 45
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 8e-40 44
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 6e-40 44
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 7e-37 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 2e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 3e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 3e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 3e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 2e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 5e-37 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 3e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 3e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 3e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 3e-42 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 3e-39 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 1e-35 43
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 2e-34 42
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 1e-40 42
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 7e-34 42
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain U35369.1.gene1.p01 Protein 2e-27 41
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene2255. Protein 2e-27 41
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-54 53
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 2e-48 45
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-42 45
Dacsa_1571 YP_007171606.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 1e-35 43