Gene Information

Name : Dacsa_1413 (Dacsa_1413)
Accession : YP_007171462.1
Strain : Dactylococcopsis salina PCC 8305
Genome accession: NC_019780
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1427254 - 1428219 bp
Length : 966 bp
Strand : -
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence :
ATGACAGCGACAACAACTTCTTGCCCTAAAATCGTTCGCATTGGGACTCGAAAAAGTAATTTAGCAATGGTACAAACCCA
CTGGGTAAGGGATGAATTGCAAAAACATTTCCCCGATTATCAGTTTGAAATTGAAGCGATGAGTACCCAAGGGGATAAAA
TTCTCGATGTGGCGTTGTCGAAAATTGGGGATAAGGGCTTATTTACGAAAGAATTAGAGTTAGGATTGCTGAATCAAGAT
GTCGATTTAGCGGTTCATTCCCTGAAAGATTTACCGACACAATTGCCAGAAGGATTGATGTTAGGCTGTGTGAGTACAAG
GGAAAATCCAGCAGATGCGCTGGTTTTAAATCAAGCCTATCAGGGATACACCATTCAAACCCTTCCCGAAGGCGCGGTGG
TAGGAACGTCTTCCCTGCGTCGTCTTGCCCAACTGCGCTATCATTATCCGAGTTTAGTGTTTAAGGATGTCCGAGGGAAT
CTCAACACTCGCTTGAAAAAGTTGGATGCAGGAGAGTATGATGCGTTAGTGTTAGCGGTTGCTGGTTTACAACGGTTGGG
AATGGGCGATCGGGTCTCACAAGCGATTCCCAGTGAGATTTCTCTTCATGCGGTGGGACAAGGGGCGTTAGGAATTGAAT
GTCGAGAAGGAGATACGGCGATTTTAGACCTGTTGAAGGCGATCGAAGATACAGAAACTCGCGATCGAACGTTAGCAGAA
AGAGCGTTTTTACGGGAATTAGAAGGCGGCTGTCAAGTTCCCATTGGGGTGAACAGTGAAATTAATGGCGATCAGTTGAC
CTTAACGGGAATGGTGGCGAGTCTCGATGGTCAACAGTTACTCAAAGATACCGTCAGCGCCGATCGAAGCGAAGTGGATC
AAATTGGTCAGGAGTTGGCACAAATTCTGAGAGGAAAAGGCGCACAAGCCATTCTCGACGAAATTTTTGCCCAGATCGAT
CGCTAA

Protein sequence :
MTATTTSCPKIVRIGTRKSNLAMVQTHWVRDELQKHFPDYQFEIEAMSTQGDKILDVALSKIGDKGLFTKELELGLLNQD
VDLAVHSLKDLPTQLPEGLMLGCVSTRENPADALVLNQAYQGYTIQTLPEGAVVGTSSLRRLAQLRYHYPSLVFKDVRGN
LNTRLKKLDAGEYDALVLAVAGLQRLGMGDRVSQAIPSEISLHAVGQGALGIECREGDTAILDLLKAIEDTETRDRTLAE
RAFLRELEGGCQVPIGVNSEINGDQLTLTGMVASLDGQQLLKDTVSADRSEVDQIGQELAQILRGKGAQAILDEIFAQID
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-60 48
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-60 48