Gene Information

Name : PCC7418_0632 (PCC7418_0632)
Accession : YP_007167071.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 711777 - 712451 bp
Length : 675 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR005829:IPR001789:IPR001867; KEGG: cyh:

DNA sequence : 
ATGAAAATTTTAATTGTTGAAGATGATGAACGCTTGAGTGAAGCCGTTGCGGAAGACTTAAGTGACCAAAACTATACGGT
TGAAACGGCAACCGATGGTATTACGGGTTTCGAGCTCGCTCATACGTTTCACTATGATCTCATTTTGCTGGATCTGATGT
TGCCACAACTCGATGGGATTACGTTATGCCAGCGTTTGCGCTCTGAGGGGAATGCAACGCCAGTTTTGATGTTAACGGCT
CGGGATACCACTAGTGATAAAGTCGTGGGTTTAGATGCGGGTGCTGATGACTATCTGGTGAAACCGTTTGAGTTACAAGA
GCTAGCAGCTCGCACTCGTGCCCTTTTACGTCGTCATCAAACCAATTTTTCACCCGCTTTAACTTGGGGAGGGCTGAAAC
TTGATCCCAACTCTTGTGAAGCCACTTATGAAGACTCGGATTTATCTCTGAGTCCAAAAGAGTATCGTCTCCTAGAGATG
TTTTTACGCAGTGGTCGTCGTGTTTTTAGTCGCAGTCAGATTTTGGATCATCTTTGGGCTTTTGAATGTTGTCCAGAAGA
AGATACCGTCAGAGCGCATATTAAGGGCTTAAGACAAAAGCTCAAAGCAGCCGGAGCACCTCCAGATTTAATCGAGACAG
TTTATGGTTTGGGATATCGTCTCAAAAAGATTTAA

Protein sequence : 
MKILIVEDDERLSEAVAEDLSDQNYTVETATDGITGFELAHTFHYDLILLDLMLPQLDGITLCQRLRSEGNATPVLMLTA
RDTTSDKVVGLDAGADDYLVKPFELQELAARTRALLRRHQTNFSPALTWGGLKLDPNSCEATYEDSDLSLSPKEYRLLEM
FLRSGRRVFSRSQILDHLWAFECCPEEDTVRAHIKGLRQKLKAAGAPPDLIETVYGLGYRLKKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator BAC0197 Protein 4e-23 42
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 4e-22 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 5e-26 41
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator BAC0347 Protein 8e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator VFG1390 Protein 5e-31 42
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator VFG0596 Protein 6e-22 42
PCC7418_0632 YP_007167071.1 winged helix family two component transcriptional regulator VFG0473 Protein 5e-20 41