Gene Information

Name : PCC7418_0525 (PCC7418_0525)
Accession : YP_007166968.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 574650 - 576755 bp
Length : 2106 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; COGs: COG0021 Transketolase; InterProIPR005474:IPR020826:IPR005478:IPR005475

DNA sequence :
ATGGGCACTGCTCAGATCTCGTTGGGTTCTCGGAGAAAACCCCTTAAAAAAATTTTCCAGTCAACCGTAGTTACAGAAGA
ATCAATTATGGTCGCTGCTACTCAATCACTCGAACAACTTTGCATCAATTCCATACGCTTTCTCGCAATTGATGCCGTCG
AAAAAGCCAGTTCTGGACACCCTGGCTTACCCATGGGGGCTGCTCCCATGGCGTTTGTCCTCTGGGATAAATTTCTGCGC
TTCAACCCCAAAAATCCCCATTGGTTCAACCGCGATCGCTTCGTTCTCTCCGCAGGACATGGTTGTATGTTGCAATATGC
CCTGCTTTATCTCACCGGTTACGATAGCGTTAGTCTAGACGATATTAAACAATTCCGTCAATGGGAATCCAAAACCCCCG
GTCACCCCGAAAACTTTATGACTGAAGGGGTAGAAGTGACCACAGGCCCCCTCGGACAAGGAATTTCTAATGCTGTCGGT
TTAGCAGCAGCAGAAGCCCATCTCGCTGCTCGTTTTAACAAACCTGATTGTCAAATTGTCGATCACTACACTTACGTCAT
CGCCAGTGATGGTGACTTAATGGAAGGCGTTTCTAATGAAGCCTGTTCTCTCGCAGGACACCTTGGACTCGGTAAACTCA
TTGCACTTTACGATGACAACCACATCTCCATTGATGGCGAAACCGAACTCTCTTTCACCGAAGATCGGATGAAACGCTAT
GAAGCCCTCGGTTGGCATACACAAGTTATTGAAGATGGTAATACTGACCTTGAAGGTCTAGAAAAAGCCATTGCTAATGC
AAAAGCAGTCACCGATAAACCTTCCATTATTGGAGTCAGAACGGTCATCGGTTTTGGTTCTCCCAATAAAGCAAACACCC
ATGATGTTCACGGGGCCGCTTTAGGAAAAGATGAAGTCGCAGCGACTCGGAAAGAACTCGGTTGGGAGTACGGCGAATTT
GAAGTTCCTGAAGATGCACTCAGCCACTTCCGTAAAGCTGTCGATCGCGGAGCGCAATCAGAACAAGAGTGGAATCAACT
CTTTGCAGAATATAAGGGCAAATATCCCGAAGACGCGAAGAATCTCCAGCAACTCATTAGCGGTGAACTCCCAGCAGGTT
GGGAAGATGCACTCCCTACTTACACCCCTGATGATAAAGCCGATGCCACTCGTAACCAGTCGGGAGCAGTCTTAAATGCC
CTTTCCCCCGTGTTACCTGGTTTAGTCGGTGGTTCCGCTGACTTAGCACCCTCCAACAAAACCTACGTCAAATCCAGTGG
TGACTTCCAAAAAGGCGCTTACGAAAACCGTAACTTCCGCTTTGGGGTTCGTGAACATGGCATGGGCGCGATTTGTAACG
CCATGGCACTCCACAATTCTGGTTTAATCCCTTATGGCGCAACCTTCCTCATCTTTACTGATTATATGCGCGGTGCAATT
CGTCTTTCTGCACTGTCTCGCGCTGGGGTAATTTGGGTAATGACTCACGACTCCATCGGTGTCGGTGAAGATGGTCCAAC
TCACCAACCCATTGAACAAGTTGCTTCCTTACGGGCGATTCCAGAATTAGCTGTTTTCCGTCCTGCTGATGGGAATGAAA
CCTCTGGGGCTTATAAAGTTGCTGTCGAACGTGCAGCAGGAAATCCTCATGCTCCCACCCTCCTCGCACTCTCTCGTCAA
AAACTCCCTAATTTACAAGGAAGTTCCATTGAAAAAGCAGCTAAAGGGGGTTATGTCCTTTCTGATAGCAACGGCACGCC
AGAACTGATTCTAATTGGTACAGGGAGTGAAGTTGAACTCTGTGTCAATGCAGCCGAACAACTTCGTCAAGAAGGGAAAA
ATGTTCGCGTTGTTTCTATGCCTTGTTGGGAACTGTTTGAAGAACAAGACGCAGGCTATAAAGAGTCAGTTTTACCGCAA
GTGGTAACGAAACGAGTGGCTGTTGAAGCGGGAACAACATTTGGCTGGTGTCGCTATGTCGGCGCTGAAGGTGAAGTCAT
TGGTATCGATCACTTTGGTGCATCCTCTCCTGGTGGCGTGGCTATGAAAAACTTTGGTTTCACCACTGAAAATGTTGTTG
AAACCGCGAAAAAAGTCTTAGGCTAA

Protein sequence :
MGTAQISLGSRRKPLKKIFQSTVVTEESIMVAATQSLEQLCINSIRFLAIDAVEKASSGHPGLPMGAAPMAFVLWDKFLR
FNPKNPHWFNRDRFVLSAGHGCMLQYALLYLTGYDSVSLDDIKQFRQWESKTPGHPENFMTEGVEVTTGPLGQGISNAVG
LAAAEAHLAARFNKPDCQIVDHYTYVIASDGDLMEGVSNEACSLAGHLGLGKLIALYDDNHISIDGETELSFTEDRMKRY
EALGWHTQVIEDGNTDLEGLEKAIANAKAVTDKPSIIGVRTVIGFGSPNKANTHDVHGAALGKDEVAATRKELGWEYGEF
EVPEDALSHFRKAVDRGAQSEQEWNQLFAEYKGKYPEDAKNLQQLISGELPAGWEDALPTYTPDDKADATRNQSGAVLNA
LSPVLPGLVGGSADLAPSNKTYVKSSGDFQKGAYENRNFRFGVREHGMGAICNAMALHNSGLIPYGATFLIFTDYMRGAI
RLSALSRAGVIWVMTHDSIGVGEDGPTHQPIEQVASLRAIPELAVFRPADGNETSGAYKVAVERAAGNPHAPTLLALSRQ
KLPNLQGSSIEKAAKGGYVLSDSNGTPELILIGTGSEVELCVNAAEQLRQEGKNVRVVSMPCWELFEEQDAGYKESVLPQ
VVTKRVAVEAGTTFGWCRYVGAEGEVIGIDHFGASSPGGVAMKNFGFTTENVVETAKKVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-150 54
tktA AAO17218.1 TktA Not tested tcd island Protein 4e-150 53