Gene Information

Name : PCC7418_0338 (PCC7418_0338)
Accession : YP_007166786.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 384929 - 385645 bp
Length : 717 bp
Strand : -
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cyc:PCC7424_3266 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC tran

DNA sequence :
ATGAACTCAATGCTGATTCGCCTTGAAGATATTTGTAAAGTATATGGGACGGGAAACACTGCGGTTCATGCCCTCAATCA
TATTAATCTCATTGTTGAAGAAGGGGAATATTGTTCCATTATGGGGGCTTCTGGTTCAGGAAAATCAACGGCGATGAATG
TGATTGGTTGTTTAGATCGCCCCACCAGTGGACGCTATTACTTAGAAAATCAGGACATTTCCCAGTTACCCAACGCAGCG
TTAGCTGAGATTCGCAATCGAAAAATTGGGTTTGTGTTTCAACAATTTCATTTACTCCCTCATCTTAGTGCGGTGGATAA
TGTGATTTTACCGATGATTTATGCGGGGGTTTCTCCTGATGAACGGAAAGAACGGGCGATTTTAGCGTTAGAAAAAGTGG
GATTGGGGAGTCGGTTGTATAATAAACCCAATCAACTCTCAGGGGGACAGCAACAACGGGTTGCCATTGCTCGCGCGATC
GTCAATAATCCTCGTTTATTGCTCGCTGATGAACCCACAGGGGCGTTAGATTCCCGCACGGTGAGAGAAGTGTTAGATAT
CTTTAAAGAACTCCATGAAGGAGGGATTACTGTAGTCATGGTGACTCATGAAGTGGATGTCGCCCGTGAAAGCAAGCGCA
TTATTTGGTTCCGTGATGGGGAAGTGATTTATTCTCATCTCACCCCCGAAGAAATGTTAGAAGTTGCGGTATCCTGA

Protein sequence :
MNSMLIRLEDICKVYGTGNTAVHALNHINLIVEEGEYCSIMGASGSGKSTAMNVIGCLDRPTSGRYYLENQDISQLPNAA
LAEIRNRKIGFVFQQFHLLPHLSAVDNVILPMIYAGVSPDERKERAILALEKVGLGSRLYNKPNQLSGGQQQRVAIARAI
VNNPRLLLADEPTGALDSRTVREVLDIFKELHEGGITVVMVTHEVDVARESKRIIWFRDGEVIYSHLTPEEMLEVAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_0338 YP_007166786.1 ABC transporter NC_012469.1.7686878. Protein 1e-53 55
PCC7418_0338 YP_007166786.1 ABC transporter NC_008702.1.4606598. Protein 4e-48 47
PCC7418_0338 YP_007166786.1 ABC transporter CP001581.1.gene798.p Protein 9e-41 45
PCC7418_0338 YP_007166786.1 ABC transporter CP001581.1.gene598.p Protein 2e-36 41