Gene Information

Name : PCC7418_3189 (PCC7418_3189)
Accession : YP_007169519.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3430598 - 3433294 bp
Length : 2697 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAGCCGACCGACCCGAGCAAGTTTACGCAACAAGCCTGGGATGTAATTGTTGATTCACAAGAAGTCGCCCGTCGCTT
TAAAAATCAGGAGTTAGAAGTAGAACATCTGATGCTGACCCTATTTTCTACTGAAGGGGTCGCCAATCAAATTTTAGAAG
CCAAACAAGTGGATGTGTCTCGTCTGCAACAGCAGCTAGAAGTGTTCACCAACCGCCAACGGAAATCAATGCGGGTGGAA
CAACTCTACTTAGGGCGAGGATTGGATCAGTTGCTCGATCGCGCGGAAAAAGCGCGACAAAGTTGGCAAGATGAGGTAAT
TGGGGTCGAACACCTCTTGTTAGGATTCGCAGAAGATGAACGGGTCGGGCGACGGTTACTGCGACCCTACAGCATTGATC
CCCAAGATGTGGAAGCAGCGATTAAAGAATTTCGCGCCAATCGTCCGCAAACAGAAGAAAGTGCAGGAGAAGCGCAAGGG
GAAGAGGAGAAGGAAAAAGAAGAAGAACAAACCCCCCTCGAAAAATACGGACGTGATTTGACGGAACAAGCTAGTGGCGG
AAAACTAGACCCCGTAATTGGTCGTGATGAAGAAATTCGGCGGGTAGTCCAAGTTTTATCTCGTCGGTCTAAAAATAATC
CTGTGTTAATTGGTGAACCAGGTGTGGGGAAAACCGCGATCGCGGAAGGCTTAGCGCAACGGATTGTGAATGGCGATGTC
CCTGAATCGCTCAAAAATCGGCAATTAATAGCATTAGATATGGGAAGCCTCATTGCAGGGGCAAAATATCGCGGAGAATT
TGAAGATCGCCTGCGGAAAGTGTTGCGGGAAGTGACCCACTCCGAGGGTCAAATCGTTCTCTTTATTGATGAATTACAAA
CCGTGGTTGGTACGGGTTCGGGTCAAGGGACAATGGATGCAGGGAACTTGTTAAAACCGATGCTGGCGCGAGGAGAGTTA
CGCTGCATTGGGGCGACCACTCTCGATGAATATCGCAAGCATATCGAAAAAGATCCTGCTTTAGAACGACGCTTTCAACA
GGTTTATGTGAAGCAGCCCGATGTAGAAGCAACCGTTTCCATTTTACGCGGACTCAAGGAACGGTACGAAGTTCATCATG
GGGTTAAAATTACTGACTCGGCGCTAGTGGCTGCTGCAAGTTTATCAGATCGCTACATCACAGACCGCTTTTTGCCCGAT
AAAGCCATTGATTTGGTGGATGAAGCAGCAGCGAAGTTAAAAATGGAGATTACTTCCAAACCGACGGAGTTAGAAAGCAT
TGATCGCCGTCTGATGCAGTTGCAAATGGAGAAATTGTCCTTAGAAGGGGAAGACGAGTTAGCCAGTGGCGGGAATACCA
GTGCTTATCGGTCTGCAAAAGAACGCCTCGAAAAGATTGAGCAAGAAATGCAGGAATTGGAAGGGAGTCAGAAGGAACTG
TCTTCGCAATGGCAATTTGAAAAACAGATGCTAGAAGAGATTAATACTCTCAAAGAAGAAGAAGATCAGTTGCGCGTACA
AGTAGAACAAGCGGAACGAGAATATGACTTAGAAAAAGCAGCCCAGTTGAAGTATGGACAGTTAGAAGGCTTACAACGCC
AACGGGAAGAGAAAGAAGGTAAATTACTGGAAATGCAGTCCCAAGGGCGGACTTTACTGCGAGAACAAGTCACCGAAGCT
GATATTGCGGAAATTGTGGCGAAATGGACCAGTATTCCCGTTAATCGCCTGTTAGAGTCCGAACGACAAAAACTCCTCGG
TTTAGAAGGCTATCTCCACGAACGGGTGATTGGTCAAAAAGAAGCGGTGGCTGCTGTTTCTGCTGCAATCAGGCGGGCGC
GTGCTGGGATGAAAGATCCCGCTCGTCCCATTGGGTCTTTCCTCTTCATGGGGCCCACAGGGGTGGGAAAAACAGAATTG
GCTCGCGCGATCGCGGAGTTTTTATTCGATAGTGAAGAATCCCTCATCCGCATTGATATGTCAGAGTACATGGAGAAACA
TTCCGTCTCTCGTCTCGTCGGTGCGCCTCCAGGTTATGTGGGCTATGAAGAAGGGGGACAACTCTCAGAACAAATCCGCC
GTCGTCCCTATTCTGTCGTGCTATTGGATGAAGTGGAAAAAGCCCATCCCGATGTCTTCAACATTCTCCTCCAAGTTTTA
GATGATGGACGCATTACCGACTCCCAAGGACGCACGGTAGATTTCCGCAACACCATTATTGTGATGACCAGTAATATTGG
TGGTGAAGATATCCTCCAATTTGCCCAAGAAGATTCGCAATATGAACAAATGCGGAAAAAAGTCTTGCAAGCCCTACGAG
AACATTTCCGCCCCGAATTTCTCAATCGCATTGATGATCTCATTATCTTCCACACCTTGCGACGCGAAGAACTCGGACGC
ATTATTACCATTCAACTACGACGGATTGAAAGCCTCTTATCCGAACAAAAAATCACTATTAAACTCACCGAAGCAGCCCA
AGATTATTTAGTGGATGTGGGCTATGATCCCGTTTACGGGGCGCGTCCCCTCAAACGAGCGATTCAACGGGAGTTAGAAA
ATCCCATCGCCACGAAAATCCTCGAAATGGCATTTACCGAAGGGGATACGATTCTTGTTGATTGTGTGGATCATCAACTG
GTGTTTAAGAAGGAAGAAGAGGCGCAATCGGTGGAAGTGGAAGTGATGTCTTCTTAG

Protein sequence :
MQPTDPSKFTQQAWDVIVDSQEVARRFKNQELEVEHLMLTLFSTEGVANQILEAKQVDVSRLQQQLEVFTNRQRKSMRVE
QLYLGRGLDQLLDRAEKARQSWQDEVIGVEHLLLGFAEDERVGRRLLRPYSIDPQDVEAAIKEFRANRPQTEESAGEAQG
EEEKEKEEEQTPLEKYGRDLTEQASGGKLDPVIGRDEEIRRVVQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIVNGDV
PESLKNRQLIALDMGSLIAGAKYRGEFEDRLRKVLREVTHSEGQIVLFIDELQTVVGTGSGQGTMDAGNLLKPMLARGEL
RCIGATTLDEYRKHIEKDPALERRFQQVYVKQPDVEATVSILRGLKERYEVHHGVKITDSALVAAASLSDRYITDRFLPD
KAIDLVDEAAAKLKMEITSKPTELESIDRRLMQLQMEKLSLEGEDELASGGNTSAYRSAKERLEKIEQEMQELEGSQKEL
SSQWQFEKQMLEEINTLKEEEDQLRVQVEQAEREYDLEKAAQLKYGQLEGLQRQREEKEGKLLEMQSQGRTLLREQVTEA
DIAEIVAKWTSIPVNRLLESERQKLLGLEGYLHERVIGQKEAVAAVSAAIRRARAGMKDPARPIGSFLFMGPTGVGKTEL
ARAIAEFLFDSEESLIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLSEQIRRRPYSVVLLDEVEKAHPDVFNILLQVL
DDGRITDSQGRTVDFRNTIIVMTSNIGGEDILQFAQEDSQYEQMRKKVLQALREHFRPEFLNRIDDLIIFHTLRREELGR
IITIQLRRIESLLSEQKITIKLTEAAQDYLVDVGYDPVYGARPLKRAIQRELENPIATKILEMAFTEGDTILVDCVDHQL
VFKKEEEAQSVEVEVMSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-95 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-98 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_3189 YP_007169519.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-107 42
PCC7418_3189 YP_007169519.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-102 41