Gene Information

Name : PCC7418_2753 (PCC7418_2753)
Accession : YP_007169105.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2986805 - 2989426 bp
Length : 2622 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCAACAAACCCCAATCAATTTACCGAAAAAACCTGGGAAGCCATTGTTAGGCTGCCAGATTTAGCCAAACAAAA
CCAACAGCAACAGATTGAAAGTGAACATTTAATGAAATCGCTGTTGGAACAAGATGGCTTAGCGAGTAGTGTCTTTAGTA
AGGCGGATGTTAGTGTCCAACGATTGCGCGATCGCGCAGATGAATTTATCAATAAACAACCGAAAATTTCTAACACAGGC
GGATCAATTTATCTCGGACGCAGTTTAGATTCTCTCTTTGATCGCGCGGAAAATTATCGCAAAAAGTTTGAAGATGAGTA
TATCTCCATTGAACATCTGCTGCTTGCATTTGCCCAAGATGATCGCTTTGGAAAAGCCCTCTATAAAGAATTTGGACTGA
CTGAGGAGAAACTAAAAGCTGTGATTCAAGATATTCGCGGATCGCAAAAAGTCACGGATCAAAACCCAGAAGGAAAATAT
GAAGCCCTGGAAAAATATGGGCGCGATTTAACCCAATGGGCGCGGGAAGGGAAATTGGATCCGGTCATTGGGCGGGATGA
CGAGATCCGACGAACCGTACAGATTTTATCACGACGGACGAAAAATAATCCCGTTCTCATTGGGGAACCCGGTGTCGGAA
AAACTGCCATTGTGGAAGGGTTGGCGCAACGGATTGTCAGTCGGGATGTGCCAGAATCCTTGCGCGATCGGAAACTCATT
GCCCTGGATATGGGCGCGTTAGTCGCTGGGGCAAAATATCGCGGTGAGTTTGAAGAACGCCTAAAAGCGGTGTTAAAAGA
GGTCACCGACGCGGAAGGACAAATCATCATGTTTATTGATGAGATTCACACCGTTGTTGGTGCTGGTGCAACTCAAGGCG
CGATGGATGCGGGAAACCTACTCAAGCCCATGTTAGCTCGGGGTGAACTGCGCTGTATTGGCGCGACCACGTTAGATGAA
TACCGTCAACACATCGAGAAAGATGCAGCGTTAGAACGTCGTTTCCAAGCGGTTTATGTGGATGAACCGAATGTGACTGA
TACCATTTCCATTCTGCGGGGTTTGAAAGAACGCTATGAAGTCCACCACGGGGTTAAAATCTCGGATCGCTGTCTGGTGG
CTGCTGCGATGTTGTCGGATCGCTATATCAGCGATCGGTTTTTACCCGATAAAGCCATTGATTTGGTGGATGAATCCGCA
GCGAAGTTAAAAATGGAAATTACCTCGAAACCCGAGGAATTAGACGAAATCGACCGTAAAATCCTGCAATTGGAAATGGA
ACGGTTATCGCTGCAAAAAGAAGACGATACCGCCTCTCAAGAACGTTTAGAAACTCTAGAAAAAGAACTGGCGGATCTCA
AAGAAGAACAAGATGAACTGAACGCCCAATGGCAAGCGGAAAAAGAAGTTATTGATCAGATTCGTAGCATCAAAGAAACG
ATTGATCAGGTTAATCTCGAAATCCAACAAGCGGAACGAGATTATGACCTCAATCGCGCTGCGGAACTGCGGTATGGTCG
CTTAACGGAACTGCAACGGCAACGTCAAGAAGCAGAAAGCAAACTGGAAGAAATGCAAAGCAGCGGACACACTCTATTGC
GGGAAGAAGTTGCAGAAGCAGACGTTGCGGAAATTATTTCTAAGTGGACGGGGATTCCCATCAGTAAATTGATGTCATCG
GAGAAAGAAAAACTCTTACACCTCGAAGATGAACTCCACGATCGCGTTGTGGGACAAGAAGAAGCGGTGCGGGCTGTTTC
CGAAGCCATCCAACGATCGCGCGCTGGTTTATCTGATCCCAATCGTCCCACTGCTAGCTTCATTTTCCTCGGTCCCACTG
GCGTAGGTAAAACCGAGTTAGCGAAAGCCCTCGCCTCTAACTTGTTTGATACGGAAACCGCCTTAGTCCGTGTGGATATG
TCGGAATACATGGAAAAACACGCTGTTTCTCGCCTCATAGGTGCGCCTCCAGGTTACGTGGGTTATGAAGAAGGAGGACA
ACTCACTGAACCCATCCGCCGTCGTCCTTATTCTGTGATTCTCTTTGATGAAATTGAGAAAGCGCACCCCGATGTGTTTA
ACATCATGTTGCAAATCTTAGATGATGGTCGCCTGACCGATTCTCAAGGGCGTGTGGTGGACTTCAAAAACACCATTATC
ATCATGACCAGTAACATCGGTTCCGATCTCATTCTCGATGTTGCTGGCGATGATTCTCGCTATGACGAAATGTATAATCG
CGTCATGGGCGCAATGCGAGAAAACTTCCGTCCAGAGTTTCTCAACCGCATTGATGAGATTATTATCTTCCATGCCTTAC
AGCGCGATCAATTACGGAATATCGTCAAACTGCAAACGCAATATCTCGAAGATCGTCTCAGCGAACAAAAACTCTCGCTA
AAACTCTCCCAAGAAGCCTTAGATTTCCTTGCCGATATTGGCTACGATCCCGTTTATGGCGCACGTCCCTTAAAACGGGC
TGTACAGCGTTATGTGGAAACGCCGATCGCGAAATCTTTACTCAAAGGCGAATTTAGCGAAGGAGATACTCTTTTTGCTG
ATGTTGCTGATGAACGCTTGACCTTTAAGCGTTTACCGGCGGAAATGTTGACCAATAGTTAA

Protein sequence :
MQPTNPNQFTEKTWEAIVRLPDLAKQNQQQQIESEHLMKSLLEQDGLASSVFSKADVSVQRLRDRADEFINKQPKISNTG
GSIYLGRSLDSLFDRAENYRKKFEDEYISIEHLLLAFAQDDRFGKALYKEFGLTEEKLKAVIQDIRGSQKVTDQNPEGKY
EALEKYGRDLTQWAREGKLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSRDVPESLRDRKLI
ALDMGALVAGAKYRGEFEERLKAVLKEVTDAEGQIIMFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRQHIEKDAALERRFQAVYVDEPNVTDTISILRGLKERYEVHHGVKISDRCLVAAAMLSDRYISDRFLPDKAIDLVDESA
AKLKMEITSKPEELDEIDRKILQLEMERLSLQKEDDTASQERLETLEKELADLKEEQDELNAQWQAEKEVIDQIRSIKET
IDQVNLEIQQAERDYDLNRAAELRYGRLTELQRQRQEAESKLEEMQSSGHTLLREEVAEADVAEIISKWTGIPISKLMSS
EKEKLLHLEDELHDRVVGQEEAVRAVSEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALASNLFDTETALVRVDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEPIRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRLTDSQGRVVDFKNTII
IMTSNIGSDLILDVAGDDSRYDEMYNRVMGAMRENFRPEFLNRIDEIIIFHALQRDQLRNIVKLQTQYLEDRLSEQKLSL
KLSQEALDFLADIGYDPVYGARPLKRAVQRYVETPIAKSLLKGEFSEGDTLFADVADERLTFKRLPAEMLTNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-103 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-99 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 4e-99 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_2753 YP_007169105.1 ATP-dependent chaperone ClpB VFG2076 Protein 3e-113 45
PCC7418_2753 YP_007169105.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-103 42