Gene Information

Name : PCC7418_2557 (PCC7418_2557)
Accession : YP_007168916.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Resistance
Product : cadmium-sensing regulator, CadC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2793449 - 2793817 bp
Length : 369 bp
Strand : +
Note : PFAM: Bacterial regulatory protein, arsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: cyt:cce_4854 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory

DNA sequence : 
ATGGCAAAGGAAAAACAGACTGATGTTTGCCAAACTTTTTGTTTCGAGACTGAGAGGGTCAACAATGCCCTCAGCACAAT
GCCGAGTGATGAAATCCTAGAAGAAACGCAAATCCTTTTTAGCGCTTTAGCCGACCAATCACGCCTGAAAATTCTCTACG
CTCTCGGTAACGGTGAGGAACTGTGTGTGTGTGATATTGCTACGATGCTCGGAGTGAAAGTTGCAACCGCTTCCCATCAA
CTCCGCAAACTCCGCGACCTCAAAATCTTAAAATATCGCAATGAAGGAAAATTAGTTTATTATTCCCTGCGAGATCAGCG
AGTCATGGATATTCTTAAGTTTGCTTTAAGTCAAATGATCCCCTGTTAG

Protein sequence : 
MAKEKQTDVCQTFCFETERVNNALSTMPSDEILEETQILFSALADQSRLKILYALGNGEELCVCDIATMLGVKVATASHQ
LRKLRDLKILKYRNEGKLVYYSLRDQRVMDILKFALSQMIPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 6e-20 43
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 6e-20 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_2557 YP_007168916.1 cadmium-sensing regulator, CadC BAC0056 Protein 9e-23 46